RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 PLEKHA6Q9Y2H5 1048 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 PMS2P1A4D2B8 440 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 GGT3PA6NGU5 568 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 ERAL1O75616 437 aaKnown RBP12.54□□□□□ -0.4
KIF3A-201ENST00000378735 FBP1P09467 338 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 GTF2F2P13984 249 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 PRF1P14222 555 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 CASRP41180 1078 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 LTBQ06643 244 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 CEBPEQ15744 281 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 WDR88Q6ZMY6 472 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 PARGQ86W56 976 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 DCUN1D3Q8IWE4 304 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
KIF3A-201ENST00000378735 F8VVB4 439 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 F8VWA3 439 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 FCMRO60667 390 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 RPN2P04844 631 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 TIMP2P16035 220 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 CFPP27918 469 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 SLC6A6P31641 620 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 MPIP34949 423 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 DUSP8Q13202 625 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 INPP5JQ15735 1006 aaPredicted RBP12.53□□□□□ -0.4
KIF3A-201ENST00000378735 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 RBM18Q96H35 190 aaKnown RBP12.53□□□□□ -0.4
KIF3A-201ENST00000378735 TEX101Q9BY14 249 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 POTEKPQ9BYX7 375 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 TINAGL1Q9GZM7 467 aaPredicted RBP12.53□□□□□ -0.4
KIF3A-201ENST00000378735 CHST6Q9GZX3 395 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 YBX2Q9Y2T7 364 aaKnown RBP12.53□□□□□ -0.4
KIF3A-201ENST00000378735 MED31Q9Y3C7 131 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 SULT2B1O00204 365 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 EIF2S3LQ2VIR3 472 aaKnown RBP12.53□□□□□ -0.4
KIF3A-201ENST00000378735 Q6ZVU0 165 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
KIF3A-201ENST00000378735 SDR9C7Q8NEX9 313 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 OR2A12Q8NGT7 310 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 ADAMTS15Q8TE58 950 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 TMEM41AQ96HV5 264 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 YIPF1Q9Y548 306 aa12.53□□□□□ -0.4
KIF3A-201ENST00000378735 FEZF1A0PJY2 475 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 OR2AT4A6NND4 320 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 F5H0A9 414 aaPredicted RBP12.52□□□□□ -0.4
KIF3A-201ENST00000378735 PPP1R3DO95685 299 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 CSRP1P21291 193 aaKnown RBP12.52□□□□□ -0.4
KIF3A-201ENST00000378735 RBM34P42696 430 aaKnown RBP12.52□□□□□ -0.4
KIF3A-201ENST00000378735 ACTBP60709 375 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 ACTG1P63261 375 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 OR1Q1Q15612 314 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 LIPNQ5VXI9 398 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 STEAP1BQ6NZ63 245 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 ZNF793Q6ZN11 406 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 TRAPPC5Q8IUR0 188 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 CLEC1AQ8NC01 280 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 SLC30A7Q8NEW0 376 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 SLC35A4Q96G79 324 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 CASD1Q96PB1 797 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.4
KIF3A-201ENST00000378735 ASF1AQ9Y294 204 aa12.52□□□□□ -0.4
KIF3A-201ENST00000378735 TBC1D3KA0A087X1G2 549 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 TBC1D3FA6NER0 549 aaPredicted RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 GYPBP06028 91 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 EPHB3P54753 998 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 AMZ1Q400G9 498 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 Q499Y3 187 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 SLC6A19Q695T7 634 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 TBC1D3GQ6DHY5 549 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 RBMS3Q6XE24 437 aaKnown RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 ZNF227Q86WZ6 799 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 CES1P1Q9UKY3 287 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 LRIT2A6NDA9 550 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 OR6C76A6NM76 312 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 EFCAB7A8K855 629 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 OR1F1O43749 312 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
KIF3A-201ENST00000378735 PMELP40967 661 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 MC3RP41968 323 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 AKR1C2P52895 323 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 AKR1C1Q04828 323 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 DUSP2Q05923 314 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 TOMM20Q15388 145 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 FCRLBQ6BAA4 426 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 DRAM2Q6UX65 266 aa12.52□□□□□ -0.41
KIF3A-201ENST00000378735 LRRTM1Q86UE6 522 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms