RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CLDN23Q96B33 292 aa17.46■□□□□ 0.39
PCDHA4-201ENST00000378125 SYT4Q9H2B2 425 aa17.46■□□□□ 0.39
PCDHA4-201ENST00000378125 ZNF768Q9H5H4 540 aaKnown RBP17.46■□□□□ 0.39
PCDHA4-201ENST00000378125 A0A1B0GTH9 108 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 LYRM1O43325 122 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 ATF1P18846 271 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 TALDO1P37837 337 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 TPRA1Q86W33 373 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 LRRC28Q86X40 367 aaPredicted RBP17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 RDH10Q8IZV5 341 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 OR6F1Q8NGZ6 308 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 PMEPA1Q969W9 287 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 RNF121Q9H920 327 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 CYSLTR2Q9NS75 346 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 NUFIP1Q9UHK0 495 aaKnown RBP17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 ZNF221Q9UK13 617 aa17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 MRPS7Q9Y2R9 242 aaKnown RBP17.46■□□□□ 0.38
PCDHA4-201ENST00000378125 WDFY4Q6ZS81 3184 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 ASCC3Q8N3C0 2202 aaKnown RBP17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 ALG1L2C9J202 215 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 ZNF354AO60765 605 aaPredicted RBP17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 SLC25A12O75746 678 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 SERPINA3P01011 423 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 KRT8P05787 483 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 EVI2BP34910 448 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 QPRTQ15274 297 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 TBRG1Q3YBR2 411 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 PM20D2Q8IYS1 436 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 FRMD6Q96NE9 622 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 OR11A1Q9GZK7 315 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 TSPAN10Q9H1Z9 355 aaPredicted RBP17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 WDR76Q9H967 626 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 NOX4Q9NPH5 578 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 BRD7Q9NPI1 651 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 DDX28Q9NUL7 540 aaKnown RBP17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 NUP210LQ5VU65 1888 aa17.45■□□□□ 0.38
PCDHA4-201ENST00000378125 ANKRD61A6NGH8 418 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 PRKAR1AP10644 381 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 GP1BBP13224 206 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 SLC6A8P48029 635 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 RAB25P57735 213 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 ISXQ2M1V0 245 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 ODF4Q2M2E3 257 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 CARFQ8N187 725 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 EXD3Q8N9H8 876 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 LIPHQ8WWY8 451 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 CCNL2Q96S94 520 aaPredicted RBP17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 CDX2Q99626 313 aaPredicted RBP17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 NPAS1Q99742 590 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 SEMA5BQ9P283 1151 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 FAM240BA0A1B0GVZ2 78 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 EEF1E1O43324 174 aaKnown RBP17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 FZD7O75084 574 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 HLA-DQB1P01920 261 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 CENPAP49450 140 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 CEP78Q5JTW2 689 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 TMEM71Q6P5X7 295 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 PLET1Q6UQ28 207 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 PRR23CQ6ZRP0 262 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 YIPF7Q8N8F6 280 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 OR6N2Q8NGY6 317 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 ABHD1Q96SE0 405 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 TTYH2Q9BSA4 534 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 NEK6Q9HC98 313 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 TAS2R5Q9NYW4 299 aa17.44■□□□□ 0.38
PCDHA4-201ENST00000378125 TMEM265A0A087WTH1 108 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 FLRT2O43155 660 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 SUSD5O60279 629 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 ZFPL1O95159 310 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 BGLAPP02818 100 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 PRKCAP17252 672 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 PGCP20142 388 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 SRP9P49458 86 aaKnown RBP17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 FBXW4P57775 412 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 RNF4P78317 190 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 CCL7P80098 99 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 FAM69BQ5VUD6 431 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 LYSMD4Q5XG99 296 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 MTFR2Q6P444 385 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 PAMR1Q6UXH9 720 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 ZNF433Q8N7K0 673 aaPredicted RBP17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 CHAC2Q8WUX2 184 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 CAPSLQ8WWF8 208 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 DERL3Q96Q80 235 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 THAP7Q9BT49 309 aaPredicted RBP17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 RBFOX1Q9NWB1 397 aaKnown RBP17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 IKZF2Q9UKS7 526 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 TMED7-TICAM2A0A0A6YYA0 188 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 A0A1W2PQM1 296 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 AKR7A3O95154 331 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 EPXP11678 715 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 NPR2P20594 1047 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 PITPNBP48739 271 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 PNLIPRP2P54317 469 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 CBFBQ13951 182 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 HSD17B12Q53GQ0 312 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 PWWP2BQ6NUJ5 590 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 TRILQ7L0X0 811 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 DPY19L4Q7Z388 723 aa17.43■□□□□ 0.38
PCDHA4-201ENST00000378125 IZUMO1Q8IYV9 350 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms