RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 NEIL3Q8TAT5 605 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 CA5BP1Q8WTZ4 195 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 CAPSLQ8WWF8 208 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 HOXB13Q92826 284 aaPredicted RBP7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 ANKRD9Q96BM1 317 aaPredicted RBP7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 CRELD1Q96HD1 420 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 TSSK2Q96PF2 358 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 ALKBH3Q96Q83 286 aaPredicted RBP7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 ALG12Q9BV10 488 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 ALG8Q9BVK2 526 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 LAT2Q9GZY6 243 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 DCSTAMPQ9H295 470 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 ELOVL3Q9HB03 270 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 SONP18583 2426 aaKnown RBP7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 DVL2O14641 736 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 RAD51DO75771 328 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 IGLV3-19P01714 112 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 ROR2Q01974 943 aaKnown RBP7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 KCTD21Q4G0X4 260 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 SLC25A24Q6NUK1 477 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 PAMR1Q6UXH9 720 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 OR2L13Q8N349 312 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 OR52N5Q8NH56 324 aa7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 GPR55Q9Y2T6 319 aaPredicted RBP7.72□□□□□ -1.17
CRNKL1-202ENST00000377340 CACNA1DQ01668 2161 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 A0A1W2PR80 420 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 H0YAE9 185 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 CYR61O00622 381 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 IGFBP1P08833 259 aaPredicted RBP7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 PRR35P0CG20 571 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 TAS2R43P59537 309 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 ZNF528Q3MIS6 628 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 C22orf42Q6IC83 251 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 BORAQ6PGQ7 559 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 ARSKQ6UWY0 536 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 MDGA2Q7Z553 956 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 LRRC17Q8N6Y2 441 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 ZBTB44Q8NCP5 570 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 ZC3H10Q96K80 434 aaKnown RBP7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 PROCRQ9UNN8 238 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 RALGAPA1Q6GYQ0 2036 aa7.71□□□□□ -1.17
CRNKL1-202ENST00000377340 FAM240BA0A1B0GVZ2 78 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PRAMEF27A3QJZ7 478 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 DPPA5A6NC42 116 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 SLC1A7O00341 560 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 MTRF1O75570 445 aaKnown RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 THBS1P07996 1170 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 CCL3P10147 92 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 MAPK3P27361 379 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 VBP1P61758 197 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 HSF1Q00613 529 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PMP22Q01453 160 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 FZD5Q13467 585 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 ACKR1Q16570 336 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PGM2L1Q6PCE3 622 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 SLC22A25Q6T423 547 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PTOV1Q86YD1 416 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 GPALPP1Q8IXQ4 340 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 UBE2FQ969M7 185 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 BORCS8Q96FH0 119 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 UBQLN3Q9H347 655 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 SLC22A11Q9NSA0 550 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 MED17Q9NVC6 651 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 RNF6Q9Y252 685 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 COA3Q9Y2R0 106 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 ZFC3H1O60293 1989 aaKnown RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 FABP12A6NFH5 140 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 H3BSA7 217 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PLOD2O00469 737 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 NOS1APO75052 506 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 NKX2-2O95096 273 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 HPP00738 406 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 HPRP00739 348 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 DBHP09172 617 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 FCGR2AP12318 317 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 C21orf33P30042 268 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PCBD1P61457 104 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 POU4F2Q12837 409 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 CLPPQ16740 277 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF628Q5EBL2 1059 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 GLT8D1Q68CQ7 371 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 CORO6Q6QEF8 472 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 C5orf46Q6UWT4 87 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 FCRLAQ7L513 359 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 MAML2Q8IZL2 1156 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 PLPP5Q8NEB5 264 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 OR5T2Q8NGG2 359 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 HDAC2Q92769 488 aaKnown RBP7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 ACTR6Q9GZN1 396 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 EMC7Q9NPA0 242 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 SPATA2Q9UM82 520 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 CADP27708 2225 aa7.71□□□□□ -1.18
CRNKL1-202ENST00000377340 QDPRP09417 244 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 LIFP15018 202 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF16P17020 682 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 HOXA6P31267 233 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 MAGEA5P43359 124 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 WNT3P56703 355 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ACTA2P62736 377 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms