RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NDUFS4O43181 175 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 OR2F2O95006 317 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 IFNW1P05000 195 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 ETFAP13804 333 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 ATP1B2P14415 290 aaPredicted RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 CA4P22748 312 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 CSTF1Q05048 431 aaKnown RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 RPE65Q16518 533 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 FGD3Q5JSP0 725 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 ACSM6Q6P461 480 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 ANGPTL5Q86XS5 388 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 SKA3Q8IX90 412 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TSPAN14Q8NG11 270 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 C18orf25Q96B23 403 aaPredicted RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 ZHX1-C8orf76Q96EF9 292 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 PSMB7Q99436 277 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TIMP4Q99727 224 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 CCDC32Q9BV29 185 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 ISYNA1Q9NPH2 558 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 LYARQ9NX58 379 aaKnown RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 SMPXQ9UHP9 88 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 GLS2Q9UI32 602 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3DA0A087WVF3 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3IA0A087WXS9 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3EA0A087X179 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3BA6NDS4 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 C17orf105B2RV13 164 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3LB9A6J9 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 MT-CO2P00403 227 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3HP0C7X1 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 IVDP26440 423 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TPI1P60174 286 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 RANP62826 216 aaKnown RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 CD47Q08722 323 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 SLBPQ14493 270 aaKnown RBP eCLIP8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3GQ6DHY5 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3CQ6IPX1 549 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 LINGO4Q6UY18 593 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TBC1D3Q8IZP1 549 aaPredicted RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 KLHDC9Q8NEP7 349 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 GNPDA2Q8TDQ7 276 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 TMEM171Q8WVE6 324 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 FAM136AQ96C01 138 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 MSI2Q96DH6 328 aaKnown RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 NKX3-1Q99801 234 aaPredicted RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 NEU3Q9UQ49 428 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 OSGIN2Q9Y236 505 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 MRPS17Q9Y2R5 130 aaKnown RBP8.21□□□□□ -1.1
UBR4-201ENST00000375218 UFC1Q9Y3C8 167 aa8.21□□□□□ -1.1
UBR4-201ENST00000375218 CENPXA8MT69 81 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 LEUTXA8MZ59 168 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 F5H768 121 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SLC28A1O00337 649 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 EMC8O43402 210 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 PRAF2O60831 178 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 FZD7O75084 574 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 RHOCP08134 193 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 CXCL8P10145 99 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 MYOGP15173 224 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 TIMP3P35625 211 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SH3BP2P78314 561 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SSBP2P81877 361 aaPredicted RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 HYAL1Q12794 435 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 FAM214AQ32MH5 1076 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 RNASE10Q5GAN6 216 aaKnown RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 LY6G6FQ5SQ64 297 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 NSUN5P2Q63ZY6 315 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 KIAA0895LQ68EN5 471 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 NUFIP2Q7Z417 695 aaKnown RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 GLB1L2Q8IW92 636 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 ZBTB8OSQ8IWT0 167 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 ZNF283Q8N7M2 679 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 FAM46DQ8NEK8 389 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 OR10G3Q8NGC4 313 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 OR4C6Q8NH72 309 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 RPL10LQ96L21 214 aaKnown RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 ARHGDIGQ99819 225 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 WDCPQ9H6R7 721 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SSR3Q9UNL2 185 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 B9D1Q9UPM9 204 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SHROOM3Q8TF72 1996 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 A0A087WWL8 130 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 TVP23AA6NH52 213 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SAC3D1A6NKF1 404 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 CYB561D2O14569 222 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 PPP1R2P9O14990 202 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 PDE6DO43924 150 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 HOXD9P28356 352 aaPredicted RBP8.2□□□□□ -1.1
UBR4-201ENST00000375218 GLP1RP43220 463 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 TCL1AP56279 114 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 DUSP6Q16828 381 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 GGTA1PQ4G0N0 100 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 TFDP3Q5H9I0 405 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 TMEM196Q5HYL7 178 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 IER5Q5VY09 327 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 CHSY1Q86X52 802 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 SPNS2Q8IVW8 549 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 EXD3Q8N9H8 876 aa8.2□□□□□ -1.1
UBR4-201ENST00000375218 OR52E5Q8NH55 327 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms