RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 F2RL1P55085 397 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 ZNF234Q14588 700 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 INPP5JQ15735 1006 aaPredicted RBP18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 KHDRBS2Q5VWX1 349 aaKnown RBP18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 DPPA4Q7L190 304 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 TMED4Q7Z7H5 227 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 TMEM200AQ86VY9 491 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 PFN4Q8NHR9 129 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 RAD51AP1Q96B01 352 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 HS6ST2Q96MM7 605 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 CD180Q99467 661 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 ZDHHC6Q9H6R6 413 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 C20orf141Q9NUB4 165 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 GNG8Q9UK08 70 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 IGHV2-5P01817 119 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 GABRR2P28476 465 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 NCBP2P52298 156 aaKnown RBP eCLIP18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 GAREM2Q75VX8 874 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 SLC29A4Q7RTT9 530 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 FIBINQ8TAL6 211 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 TCTEX1D2Q8WW35 142 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 OTUB2Q96DC9 234 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 GGACTQ9BVM4 153 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 LAT2Q9GZY6 243 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 C1orf198Q9H425 327 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 UFSP2Q9NUQ7 469 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 FBXO4Q9UKT5 387 aa18.85■□□□□ 0.61
TMEFF1-201ENST00000374879 A0A0G2JN53 185 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 CPED1A4D0V7 1026 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 STARD6P59095 220 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 ACTC1P68032 377 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 ACTA1P68133 377 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 KLHL26Q53HC5 615 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 OR52W1Q6IF63 320 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 OR5AP2Q8NGF4 316 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 OR5M8Q8NGP6 311 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 OR10R2Q8NGX6 335 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 PPP1R1CQ8WVI7 109 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 LHX9Q9NQ69 397 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 DENND4CQ5VZ89 1909 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 A0A1B0GTQ1 180 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 GLOD5A6NK44 160 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 PMS2P2O95744 297 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 CD3DP04234 171 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 CSF1P09603 554 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 ZNF14P17017 642 aaPredicted RBP18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 RCC1P18754 421 aaPredicted RBP18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 TGIF1Q15583 401 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 LIPNQ5VXI9 398 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 RPL22L1Q6P5R6 122 aaKnown RBP18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 STOML3Q8TAV4 291 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 ZMYND19Q96E35 227 aaPredicted RBP18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 ZDHHC12Q96GR4 267 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 SFXN1Q9H9B4 322 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 MMP26Q9NRE1 261 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 TMEM100Q9NV29 134 aa18.84■□□□□ 0.61
TMEFF1-201ENST00000374879 A0A1B0GTI1 187 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 GGT3PA6NGU5 568 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 PHYHO14832 338 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 RDH16O75452 317 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 CALCBP10092 127 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 ZNF750Q32MQ0 723 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 PRRT3Q5FWE3 981 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 Q6ZVL8 140 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 PARGQ86W56 976 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 CMTM8Q8IZV2 173 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 C15orf40Q8WUR7 153 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 EDEM2Q9BV94 578 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 TMEM27Q9HBJ8 222 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 TREM2Q9NZC2 230 aa18.83■□□□□ 0.61
TMEFF1-201ENST00000374879 VEGFDO43915 354 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 AKAIN1P0CW23 69 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 TGM3Q08188 693 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 ILF3Q12906 894 aaKnown RBP eCLIP18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 ELAVL1Q15717 326 aaKnown RBP18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 C22orf39Q6P5X5 142 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 HSD11B1LQ7Z5J1 315 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 TCEAL8Q8IYN2 117 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 DND1Q8IYX4 353 aaKnown RBP18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 MYLIPQ8WY64 445 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 UBE2E3Q969T4 207 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 ALX4Q9H161 411 aaPredicted RBP18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 NCDNQ9UBB6 729 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 PPIL1Q9Y3C6 166 aa18.83■□□□□ 0.6
TMEFF1-201ENST00000374879 A0A087WV48 116 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 SYNDIG1LA6NDD5 238 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 IDSB3KWA1 339 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 H7BY64 318 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 FCMRO60667 390 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 PAPLNO95428 1278 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 CD63P08962 238 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 AVPR2P30518 371 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 NAA10P41227 235 aaPredicted RBP18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 PJVKQ0ZLH3 352 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 ENPP7Q6UWV6 458 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 OR51L1Q8NGJ5 315 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 SNX33Q8WV41 574 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 IL17FQ96PD4 163 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 SLITRK2Q9H156 845 aa18.82■□□□□ 0.6
TMEFF1-201ENST00000374879 KLHL28Q9NXS3 571 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms