RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 NIPAL3Q6P499 406 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ULK3Q6PHR2 472 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 LRFN4Q6PJG9 635 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 LINGO2Q7L985 606 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 LUZP2Q86TE4 346 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 WDR76Q9H967 626 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ZNF222Q9UK12 451 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 TRAV20A0A0B4J274 112 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 YKT6O15498 198 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 NDUFB2O95178 105 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 MGAT2Q10469 447 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 PLK5Q496M5 336 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ESCO2Q56NI9 601 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 SLC29A4Q7RTT9 530 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 RAB43Q86YS6 212 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 OR10Z1Q8NGY1 313 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 LYRM4Q9HD34 91 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ENAMQ9NRM1 1142 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 EXOSC1Q9Y3B2 195 aaKnown RBP9.87□□□□□ -0.83
CXCL12-203ENST00000374429 DSPPQ9NZW4 1301 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 SYT5O00445 386 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 SLC16A7O60669 478 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 SBK2P0C263 348 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ELK1P19419 428 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 AFF3P51826 1226 aaKnown RBP9.87□□□□□ -0.83
CXCL12-203ENST00000374429 OCLNQ16625 522 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 AADACL4Q5VUY2 407 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 OR7E24Q6IFN5 339 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 QSOX2Q6ZRP7 698 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.87□□□□□ -0.83
CXCL12-203ENST00000374429 GJD3Q8N144 294 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 OR8S1Q8NH09 359 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 TSEN15Q8WW01 171 aaKnown RBP9.87□□□□□ -0.83
CXCL12-203ENST00000374429 SEMA4CQ9C0C4 833 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 CDCP1Q9H5V8 836 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 RANGRFQ9HD47 186 aaPredicted RBP9.87□□□□□ -0.83
CXCL12-203ENST00000374429 NDUFB11Q9NX14 153 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 MED29Q9NX70 200 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ACAD8Q9UKU7 415 aa9.87□□□□□ -0.83
CXCL12-203ENST00000374429 ATMQ13315 3056 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PIAS2O75928 621 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 CELA2AP08217 269 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SLC2A1P11166 492 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 NME1P15531 152 aaKnown RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 IL11P20809 199 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 RORAP35398 523 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 HSD11B2P80365 405 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PLAURQ03405 335 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 LINC00518Q8N0U6 118 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ARHGAP9Q9BRR9 750 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 FBRSQ9HAH7 460 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PCOLCE2Q9UKZ9 415 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 COPS3Q9UNS2 423 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ZFHX4Q86UP3 3567 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 OR6C70A6NIJ9 312 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SRPX2O60687 465 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PDGFAP04085 211 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 YES1P07947 543 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 HTR1FP30939 366 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ACAA2P42765 397 aaKnown RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 CDKN2AP42771 156 aaKnown RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 CAPZA2P47755 286 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 GDI2P50395 445 aaKnown RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ZNF45Q02386 682 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 QPRTQ15274 297 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 OR7A5Q15622 319 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 LHFPL5Q8TAF8 219 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 TRMT10AQ8TBZ6 339 aaKnown RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 STT3BQ8TCJ2 826 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 VSTM2LQ96N03 204 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 G6PC3Q9BUM1 346 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 GAREM1Q9H706 876 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 FBXO8Q9NRD0 319 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 LAMP5Q9UJQ1 280 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SLC35A3Q9Y2D2 325 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 CEP295Q9C0D2 2601 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 TLCD2A6NGC4 264 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 LINC01387J3KSC0 135 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ZNF264O43296 627 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SMIM10L1P0DMW3 83 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SPINK2P20155 84 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 CSF2RBP32927 897 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 RFC3P40938 356 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PSPHP78330 225 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 CFHR1Q03591 330 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ZNF79Q15937 498 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 YOD1Q5VVQ6 348 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 VASNQ6EMK4 673 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PLXDC1Q8IUK5 500 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 DEFB123Q8N688 67 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 ABHD4Q8TB40 342 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PTPMT1Q8WUK0 201 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-203ENST00000374429 FBXW5Q969U6 566 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SMIM10Q96HG1 83 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 SIGLEC11Q96RL6 698 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 VN1R1Q9GZP7 353 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 MIXL1Q9H2W2 232 aa9.86□□□□□ -0.83
CXCL12-203ENST00000374429 PLEKHB1Q9UF11 243 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms