RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 NUBP1P53384 320 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 MRPL28Q13084 256 aaKnown RBP11.35□□□□□ -0.59
PRPF4-202ENST00000374199 PLEKHG7Q6ZR37 379 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 ZNF563Q8TA94 476 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 DUSP19Q8WTR2 217 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 CHAC2Q8WUX2 184 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 C4orf36Q96KX1 117 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 NDEL1Q9GZM8 345 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 TXNIPQ9H3M7 391 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 NCDNQ9UBB6 729 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 CABIN1Q9Y6J0 2220 aa11.35□□□□□ -0.59
PRPF4-202ENST00000374199 CFAP54Q96N23 3096 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 IGLV1-36A0A0B4J1U3 117 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 C4orf47A7E2U8 309 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 F8A1P23610 371 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 CXCR1P25024 350 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 ADH6P28332 368 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 E2F1Q01094 437 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 PON3Q15166 354 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 GXYLT1Q4G148 440 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 C16orf87Q6PH81 154 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 KCTD20Q7Z5Y7 419 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 TPRA1Q86W33 373 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 SYT14Q8NB59 555 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 OR2M3Q8NG83 312 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 PHYHIPQ92561 330 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 ALG12Q9BV10 488 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 SLC7A5P2Q9GIP4 190 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 LOC102725191A0A1B0GVB3 256 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 MS4A18H0YCH9 400 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 DCTN6O00399 190 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 CTDSP2O14595 271 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 OR2T1O43869 369 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 CDRT1O95170 752 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 AVPR2P30518 371 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 OR12D2P58182 307 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 KRR1Q13601 381 aaKnown RBP11.34□□□□□ -0.59
PRPF4-202ENST00000374199 MS4A18Q3C1V0 323 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 RPL22L1Q6P5R6 122 aaKnown RBP11.34□□□□□ -0.59
PRPF4-202ENST00000374199 OR6V1Q8N148 313 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 WDSUB1Q8N9V3 476 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 SLC22A8Q8TCC7 542 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 SRRQ9GZT4 340 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 TSPAN10Q9H1Z9 355 aaPredicted RBP11.34□□□□□ -0.59
PRPF4-202ENST00000374199 ZNF346Q9UL40 294 aaKnown RBP11.34□□□□□ -0.59
PRPF4-202ENST00000374199 GSTK1Q9Y2Q3 226 aa11.34□□□□□ -0.59
PRPF4-202ENST00000374199 hCG_2014768A0A024R1R8 64 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 PNMA8CA0A1B0GUJ8 204 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 UPK3AO75631 287 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 GYPBP06028 91 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 CLEC2LP0C7M8 214 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 PSKH1P11801 424 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 CELP19835 753 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 CASP3P42574 277 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 CTXN1P60606 82 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 CRTC2Q53ET0 693 aaPredicted RBP11.33□□□□□ -0.59
PRPF4-202ENST00000374199 FAM98AQ8NCA5 519 aaKnown RBP11.33□□□□□ -0.59
PRPF4-202ENST00000374199 OR10H4Q8NGA5 316 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 MAP6Q96JE9 813 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 SLC30A2Q9BRI3 323 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 ANGPTL4Q9BY76 406 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 OR51V1Q9H2C8 321 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 KLHL1Q9NR64 748 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 TOR4AQ9NXH8 423 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 CMAHPQ9Y471 501 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 FKBP7Q9Y680 259 aa11.33□□□□□ -0.59
PRPF4-202ENST00000374199 WDFY4Q6ZS81 3184 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 A0A1W2PNU3 283 aaPredicted RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 UCHL1P09936 223 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 RPL27P61353 136 aaKnown RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 MFSD13AQ14CX5 517 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 KLHL12Q53G59 568 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 CEP78Q5JTW2 689 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 LEG1Q6P5S2 330 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 METAP1DQ6UB28 335 aaPredicted RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 NANOGNBQ7Z5D8 188 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 KCTD12Q96CX2 325 aaKnown RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 ZMYND19Q96E35 227 aaPredicted RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 KCNN2Q9H2S1 579 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 DVL2O14641 736 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 OR2J2O76002 312 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 FKBP2P26885 142 aaKnown RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 INSM1Q01101 510 aaPredicted RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 EGR3Q06889 387 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 DBPQ10586 325 aaPredicted RBP11.33□□□□□ -0.6
PRPF4-202ENST00000374199 STEAP3Q658P3 488 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 SLC6A19Q695T7 634 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 TCEAL6Q6IPX3 200 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 ZFP41Q8N8Y5 198 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 ABHD4Q8TB40 342 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 PAQR8Q8TEZ7 354 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 TCEAL3Q969E4 200 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 C8orf44Q96CB5 159 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 ARRDC1-AS1Q9H2J1 176 aa11.33□□□□□ -0.6
PRPF4-202ENST00000374199 LIPT2A6NK58 231 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 SCO2O43819 266 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 SELENOFO60613 162 aa11.32□□□□□ -0.6
PRPF4-202ENST00000374199 IMPDH2P12268 514 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms