RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GHSRQ92847 366 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM203Q969S6 136 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 CLIP3Q96DZ5 547 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 C4orf36Q96KX1 117 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 PGLYRP3Q96LB9 341 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 GAL3ST4Q96RP7 486 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 GFM1Q96RP9 751 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TIMP4Q99727 224 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TM9SF2Q99805 663 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ALG12Q9BV10 488 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TMED9Q9BVK6 235 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 HDHD5Q9BXW7 423 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ACTR6Q9GZN1 396 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 COMMD4Q9H0A8 199 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TPK1Q9H3S4 243 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 PTGES2Q9H7Z7 377 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 WDR76Q9H967 626 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 DHCR7Q9UBM7 475 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 GPN3Q9UHW5 284 aaPredicted RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 PAIP2BQ9ULR5 123 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 PCDHGA5Q9Y5G8 931 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 ETV7Q9Y603 341 aa7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 GOLGA4Q13439 2230 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-202ENST00000373720 TMED7-TICAM2A0A0A6YYA0 188 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 C9J4A7 227 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 BLOC1S5-TXNDC5H3BN57 136 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 NTN3O00634 580 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ADAM11O75078 769 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 UBL3O95164 117 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ECDO95905 644 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 CALCBP10092 127 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 HLA-DMAP28067 261 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 GTF2E2P29084 291 aaKnown RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 PITPNBP48739 271 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 GDI2P50395 445 aaKnown RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 CCR4P51679 360 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 AP3S2P59780 193 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 E2F1Q01094 437 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 MC2RQ01718 297 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ROM1Q03395 351 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 GLO1Q04760 184 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 EGR4Q05215 589 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 RPL18Q07020 188 aaKnown RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 KCNAB1Q14722 419 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 QPRTQ15274 297 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM189A2Q15884 450 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 SOWAHCQ53LP3 525 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 VWA2Q5GFL6 755 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF684Q5T5D7 378 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 C1orf140Q5VVS0 124 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 AGAP6Q5VW22 663 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF385CQ66K41 422 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 SFXN4Q6P4A7 337 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 LEG1Q6P5S2 330 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ZC3H14Q6PJT7 736 aaKnown RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 OPN5Q6U736 354 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 CCBE1Q6UXH8 406 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 AKAP14Q86UN6 197 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 CDC20BQ86Y33 519 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 Q8N402 240 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 Q8N9G6 341 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 EXD3Q8N9H8 876 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 APCDD1LQ8NCL9 501 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 M1APQ8TC57 530 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 TSLPQ969D9 159 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ITFG2Q969R8 447 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ZBTB8AQ96BR9 441 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 NXPE2Q96DL1 559 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 FRMD6Q96NE9 622 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 AGAP4Q96P64 663 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 OR6C1Q96RD1 312 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 INTS14Q96SY0 518 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 NMNAT3Q96T66 252 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 B3GNT4Q9C0J1 378 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ENKD1Q9H0I2 346 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 NIPAL2Q9H841 368 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 RBFOX1Q9NWB1 397 aaKnown RBP7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 QPCTLQ9NXS2 382 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 EMC3Q9P0I2 261 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 KLHL9Q9P2J3 617 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 NCDNQ9UBB6 729 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 ST6GALNAC2Q9UJ37 374 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 LAMP5Q9UJQ1 280 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 SPATA2Q9UM82 520 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 TMED7Q9Y3B3 224 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 CEP192Q8TEP8 1941 aa7.91□□□□□ -1.14
SNRNP40-202ENST00000373720 THADAQ6YHU6 1953 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 A0A1W2PNV4 684 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 PRSS37A4D1T9 235 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 MEGF11A6BM72 1044 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 OR6C68A6NDL8 312 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 NAP1L6A6NFF2 107 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 MEN1O00255 615 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 WWP2O00308 870 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 DNPH1O43598 174 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SIGLEC6O43699 453 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 GSTZ1O43708 216 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 SUSD5O60279 629 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 AQP8O94778 261 aa7.9□□□□□ -1.14
SNRNP40-202ENST00000373720 VAMP5O95183 116 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms