RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 VMACQ2NL98 169 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 RABL3Q5HYI8 236 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 FAM91A1Q658Y4 838 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 FAM166AQ6J272 317 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 ULK3Q6PHR2 472 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 C5orf46Q6UWT4 87 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 TMEM99Q8N816 258 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR52N5Q8NH56 324 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 RNF217Q8TC41 542 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC26A7Q8TE54 656 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 PIF1Q9H611 641 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 PARPBPQ9NWS1 579 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 FLVCR1Q9Y5Y0 555 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 CCT8L1PA6NM43 557 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 M0QX08 132 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 NPIPB7O75200 414 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 RAD51DO75771 328 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 IGHV3-9P01782 118 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 HNF1AP20823 631 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 IGFBP5P24593 272 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 SPOCK1Q08629 439 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC17A1Q14916 467 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 FAM120AOSQ5T036 256 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 LIPNQ5VXI9 398 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 FBXW9Q5XUX1 488 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 GPAT4Q86UL3 456 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 MFSD8Q8NHS3 518 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC38A4Q969I6 547 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC47A1Q96FL8 570 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 SF3B5Q9BWJ5 86 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 NSRP1Q9H0G5 558 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 CHODLQ9H9P2 273 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC25A15Q9Y619 301 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 PMF1-BGLAPU3KQ54 211 aa16.79■□□□□ 0.28
TRAPPC3-204ENST00000373166 LOC100289279A0A1B0GTE1 492 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 M0R3H8 397 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 RPS5P46782 204 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 GZMMP51124 257 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR1Q1Q15612 314 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 TMEM225Q6GV28 225 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 ERICH5Q6P6B1 374 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 B3GLCTQ6Y288 498 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 IL17RELQ6ZVW7 336 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 SPATA21Q7Z572 469 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR9K2Q8NGE7 335 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 RP9Q8TA86 221 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 RASSF5Q8WWW0 418 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 TMEM45BQ96B21 275 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC25A36Q96CQ1 311 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 RCN3Q96D15 328 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 ARHGDIGQ99819 225 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 PRR14Q9BWN1 585 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 MALT1Q9UDY8 824 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 ALPK2Q86TB3 2170 aa16.78■□□□□ 0.28
TRAPPC3-204ENST00000373166 A0A0B4J2E0 115 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 A0A1B0GX12 115 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 M0R1B8 84 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR2T1O43869 369 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 FMO6PO60774 539 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 VAMP5O95183 116 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 LGI1O95970 557 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 EGR4Q05215 589 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 DUSP7Q16829 419 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 SWT1Q5T5J6 900 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 CALHM3Q86XJ0 350 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 POU5F2Q8N7G0 328 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 GPR32P1Q8NGA4 272 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 TAMM41Q96BW9 452 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 KTI12Q96EK9 354 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 MCHR1Q99705 422 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 PTDSS2Q9BVG9 487 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 FAM107BQ9H098 131 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 FKRPQ9H9S5 495 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 ASB6Q9NWX5 421 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 RASD1Q9Y272 281 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 ATP23Q9Y6H3 246 aa16.77■□□□□ 0.28
TRAPPC3-204ENST00000373166 TRAV36DV7A0A075B6V5 113 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 SLC35F4A4IF30 521 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 FTCDNL1E5RQL4 147 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 GGTLC2Q14390 218 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 FAM69AQ5T7M9 428 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 OR7E24Q6IFN5 339 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 CCDC80Q76M96 950 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 AAED1Q7RTV5 226 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 ARPINQ7Z6K5 226 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 VANGL1Q8TAA9 524 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 MUS81Q96NY9 551 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 EPYCQ99645 322 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 ELAC2Q9BQ52 826 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 TAS2R16Q9NYV7 291 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 UPB1Q9UBR1 384 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 FREM1Q5H8C1 2179 aa16.76■□□□□ 0.27
TRAPPC3-204ENST00000373166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■■■■□ 20.6
TRAPPC3-204ENST00000373166 IGKV1D-42A0A075B6H8 117 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 A0A087WUJ7 227 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 A0A1W2PR80 420 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 FAM220BPB1ANY3 271 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 NDUFS8O00217 210 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 LY6HO94772 140 aa16.75■□□□□ 0.27
TRAPPC3-204ENST00000373166 IFNA14P01570 189 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms