RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 PNMA8CA0A1B0GUJ8 204 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 A0A1W2PPB8 328 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 A0A1W2PRS3 328 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 KIR3DP1A8MWS1 328 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 CDRT15L2A8MXV6 281 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 M0R3G1 203 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 SNPHO15079 494 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 PLGP00747 810 aaPredicted RBP12.41□□□□□ -0.42
PTPRF-202ENST00000372405 SHC1P29353 583 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 DIO1P49895 249 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 HCCSP53701 268 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ZNF85Q03923 595 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 TPBGQ13641 420 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 OR7A5Q15622 319 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 GLYR1Q49A26 553 aaPredicted RBP12.41□□□□□ -0.42
PTPRF-202ENST00000372405 EMC4Q5J8M3 183 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 SSX6Q7RTT6 188 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 DTX1Q86Y01 620 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 BEST3Q8N1M1 668 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 KLHL36Q8N4N3 616 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ZFP41Q8N8Y5 198 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 THOC3Q96J01 351 aaKnown RBP12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ALG8Q9BVK2 526 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ISYNA1Q9NPH2 558 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 INIPQ9NRY2 104 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 SF3B6Q9Y3B4 125 aaKnown RBP12.41□□□□□ -0.42
PTPRF-202ENST00000372405 A0A1W2PQL4 384 aaPredicted RBP12.41□□□□□ -0.42
PTPRF-202ENST00000372405 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ANKRD33BA6NCL7 494 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 LIPT2A6NK58 231 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.41□□□□□ -0.42
PTPRF-202ENST00000372405 MS4A18H0YCH9 400 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 TM4SF5O14894 197 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 RNF13O43567 381 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 OPN1LWP04000 364 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 HLA-DOBP13765 273 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 LIFP15018 202 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 AHCYP23526 432 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 PYCR1P32322 319 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 IDUAP35475 653 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 SLC25A1P53007 311 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 GALEQ14376 348 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 TGIF1Q15583 401 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ACKR1Q16570 336 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 MS4A18Q3C1V0 323 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 VASNQ6EMK4 673 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 TMPRSS12Q86WS5 348 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 KDM8Q8N371 416 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ZNF519Q8TB69 540 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 DDIT4LQ96D03 193 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ZHX1-C8orf76Q96EF9 292 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 SGCZQ96LD1 299 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 POTEKPQ9BYX7 375 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 DCSTAMPQ9H295 470 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 PTGES2Q9H7Z7 377 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 ZMIZ1Q9ULJ6 1067 aa12.41□□□□□ -0.42
PTPRF-202ENST00000372405 FZD7O75084 574 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 UGT2B10P36537 528 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 NAA10P41227 235 aaPredicted RBP12.4□□□□□ -0.42
PTPRF-202ENST00000372405 MAP2K6P52564 334 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 ROR2Q01974 943 aaKnown RBP12.4□□□□□ -0.42
PTPRF-202ENST00000372405 ACSM1Q08AH1 577 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 MYBPHQ13203 477 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 PON3Q15166 354 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 DCAF10Q5QP82 559 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 GPR139Q6DWJ6 353 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 RAB43Q86YS6 212 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 WDFY1Q8IWB7 410 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 TIMMDC1Q9NPL8 285 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 INPP5EQ9NRR6 644 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 CAB39Q9Y376 341 aaPredicted RBP12.4□□□□□ -0.42
PTPRF-202ENST00000372405 ZFHX4Q86UP3 3567 aa12.4□□□□□ -0.42
PTPRF-202ENST00000372405 CEP250Q9BV73 2442 aa12.4□□□□□ -0.43
PTPRF-202ENST00000372405 ZIC3O60481 467 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 SELENOFO60613 162 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 TRIM3O75382 744 aaPredicted RBP12.39□□□□□ -0.43
PTPRF-202ENST00000372405 CLPXO76031 633 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 IGHMP01871 453 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 TFPIP10646 304 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
PTPRF-202ENST00000372405 RPS25P62851 125 aaKnown RBP12.39□□□□□ -0.43
PTPRF-202ENST00000372405 POU4F2Q12837 409 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 TIGD3Q6B0B8 471 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 C3orf33Q6P1S2 294 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 KLBQ86Z14 1044 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 OR6V1Q8N148 313 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 IL22RA1Q8N6P7 574 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 OR1J4Q8NGS1 313 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 OR6K6Q8NGW6 343 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 ADAMTS14Q8WXS8 1223 aa12.39□□□□□ -0.43
PTPRF-202ENST00000372405 CNN2Q99439 309 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms