RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 VASH1Q7L8A9 365 aaPredicted RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 LAX1Q8IWV1 398 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 ESX1Q8N693 406 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 ZFP41Q8N8Y5 198 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 GDPD1Q8N9F7 314 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 FAM98AQ8NCA5 519 aaKnown RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 FAM83FQ8NEG4 500 aaPredicted RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 OR52E2Q8NGJ4 325 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 OR1N1Q8NGS0 311 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 OR5W2Q8NH69 310 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 CNN2Q99439 309 aaKnown RBP12.79□□□□□ -0.36
LDB3-204ENST00000372066 NEURL2Q9BR09 285 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 NUDT9Q9BW91 350 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 SRRQ9GZT4 340 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 TPK1Q9H3S4 243 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 IER3IP1Q9Y5U9 82 aa12.79□□□□□ -0.36
LDB3-204ENST00000372066 BSNQ9UPA5 3926 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 MCIDASD6RGH6 385 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 CDC40O60508 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
LDB3-204ENST00000372066 TSPAN2O60636 221 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 REM1O75628 298 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 NSDHLQ15738 373 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 ZNF74Q16587 644 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 EMC4Q5J8M3 183 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 ATP1A1-AS1Q5TC04 95 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 PAMR1Q6UXH9 720 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 TPRA1Q86W33 373 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 MS4A15Q8N5U1 240 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 HAVCR2Q8TDQ0 301 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
LDB3-204ENST00000372066 SDHCQ99643 169 aaPredicted RBP12.78□□□□□ -0.36
LDB3-204ENST00000372066 TIMP4Q99727 224 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 WWTR1Q9GZV5 400 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 ABCB9Q9NP78 766 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
LDB3-204ENST00000372066 IGLV3-12A0A075B6K2 115 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 A0A1W2PQL4 384 aaPredicted RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 ZC3H12DA2A288 527 aaKnown RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 A8MUA0 341 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ALG1L2C9J202 215 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 TXNDC12O95881 172 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 DLGAP3O95886 979 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 SERPINA3P01011 423 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 CLEC2LP0C7M8 214 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 CCR4P51679 360 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 SLC25A1P53007 311 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 FOXK1P85037 733 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ZNF85Q03923 595 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 PLCXD2Q0VAA5 305 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 PON3Q15166 354 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 GLYR1Q49A26 553 aaPredicted RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 C6orf15Q6UXA7 325 aaPredicted RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 C9orf40Q8IXQ3 194 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ZNF321PQ8N8H1 164 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ZNF441Q8N8Z8 693 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 TEX19Q8NA77 164 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 SYT14Q8NB59 555 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 SDR9C7Q8NEX9 313 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 TP53INP1Q96A56 240 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 CLIP3Q96DZ5 547 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ARSGQ96EG1 525 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 GAL3ST4Q96RP7 486 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 LMF1Q96S06 567 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ULBP3Q9BZM4 244 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 NMNAT2Q9BZQ4 307 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 MIXL1Q9H2W2 232 aa12.77□□□□□ -0.36
LDB3-204ENST00000372066 ISG20L2Q9H9L3 353 aaKnown RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 MRPS18BQ9Y676 258 aaKnown RBP12.77□□□□□ -0.36
LDB3-204ENST00000372066 GNB5O14775 395 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 SLC19A2O60779 497 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 CD14P08571 375 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 CYC1P08574 325 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 PGCP20142 388 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 MYL9P24844 172 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 DIO1P49895 249 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 SCN1BQ07699 218 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 RIN1Q13671 783 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 ZNF79Q15937 498 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 FAAH2Q6GMR7 532 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 TMEM91Q6ZNR0 172 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 MISPQ8IVT2 679 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 ZNF563Q8TA94 476 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 DIRAS2Q96HU8 199 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 C4orf36Q96KX1 117 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 ADOQ96SZ5 270 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 DDOQ99489 341 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 TBX5Q99593 518 aa12.77□□□□□ -0.37
LDB3-204ENST00000372066 HDHD5Q9BXW7 423 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms