RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SMLR1H3BR10 107 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 FOXE1O00358 373 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 FCGR2AP12318 317 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 SMAD2Q15796 467 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 TMEM184AQ6ZMB5 413 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 RNF141Q8WVD5 230 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 CPNE4Q96A23 557 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 C20orf85Q9H1P6 137 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 MTCL1Q9Y4B5 1905 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 ELK1P19419 428 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 NME2P22392 152 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 HNRNPA2B1P22626 353 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 NUDT1P36639 197 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 CAMK2BQ13554 666 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 TESK1Q15569 626 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 MRPL2Q5T653 305 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 SCML1Q9UN30 329 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 PTRH2Q9Y3E5 179 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 TRBV4-1A0A0J9YWV2 114 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 TCRBV3S1A0A5B6 114 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 MCRIP1C9JLW8 97 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 ICMTO60725 284 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 PMP2P02689 132 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 ETV6P41212 452 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 IKZF1Q13422 519 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 GLYR1Q49A26 553 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 GATA6Q92908 595 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 SRRQ9GZT4 340 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 C1orf198Q9H425 327 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 IDUAP35475 653 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 POU3F1Q03052 451 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 SOHLH1Q5JUK2 328 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 IL34Q6ZMJ4 242 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 GCNT2Q8N0V5 402 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 CORO2AQ92828 525 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 INTS12Q96CB8 462 aaKnown RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 C16orf70Q9BSU1 422 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 KATNB1Q9BVA0 655 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 TP53BP1Q12888 1972 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-202ENST00000369984 BLACEA4D250 179 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 CTRB1P17538 263 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 OPRD1P41143 372 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 P2RY2P41231 377 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 KIR2DS3Q14952 304 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 CTRB2Q6GPI1 263 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 OR56B1Q8NGI3 324 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 TMEM59Q9BXS4 323 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 METTL9Q9H1A3 318 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 V9GYS6 101 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 DOCK10Q96BY6 2186 aa11.6□□□□□ -0.55
HCFC1-202ENST00000369984 ZNF593O00488 134 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OR7C1O76099 320 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 F13BP05160 661 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 RFC3P40938 356 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 TBCEQ15813 527 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 CD300LGQ6UXG3 332 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OR1M1Q8NGA1 313 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 MACROD1Q9BQ69 325 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 NTMT1Q9BV86 223 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 SELENOIQ9C0D9 397 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 ACTL7AQ9Y615 435 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 BTBD17A6NE02 478 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 TIMM8AO60220 97 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 SUSD5O60279 629 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 HTR5AP47898 357 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 HBA1P69905 142 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 TRIM61Q5EBN2 209 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 C12orf76Q8N812 135 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 SEC22AQ96IW7 307 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OR52A4PA6NMU1 304 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 GASTP01350 101 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 CASP3P42574 277 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 NR0B2Q15466 257 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 MMP21Q8N119 569 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 ZNF566Q969W8 418 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 AMDHD1Q96NU7 426 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 NGBQ9NPG2 151 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 MROH6A6NGR9 719 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 TOX4O94842 621 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OR8U8P0C7N1 319 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 USF1P22415 310 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 CARD18P57730 90 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OPCMLQ14982 345 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 C15orf54Q8N8G6 183 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 GGHQ92820 318 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 WWTR1Q9GZV5 400 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 GNB4Q9HAV0 340 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 UBQLN4Q9NRR5 601 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 ITGB4P16144 1822 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 CLDN24A6NM45 220 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 NFYBP25208 207 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 PSMB3P49720 205 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 NRARPQ7Z6K4 114 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OR13C2Q8NGS9 318 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms