RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CRB3Q9BUF7 120 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 EBPLQ9BY08 206 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 GPR87Q9BY21 358 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF700Q9H0M5 742 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 LRTM1Q9HBL6 345 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PIPOXQ9P0Z9 390 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CHST2Q9Y4C5 530 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ANXA2P2A6NMY6 339 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 APOC3P02656 99 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 HCKP08631 526 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 EBLN1P0CF75 366 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 FGF9P31371 208 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 SDC2P34741 201 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 SRSF11Q05519 484 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MLLT11Q13015 90 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MAPKAPK3Q16644 382 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 FAM174BQ3ZCQ3 159 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 GGTA1PQ4G0N0 100 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RFTN2Q52LD8 501 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PYDC2Q56P42 97 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM201Q5SNT2 666 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MANEAQ5SRI9 462 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 SZRD1Q7Z422 152 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RNF175Q8N4F7 328 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 C19orf47Q8N9M1 422 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 BEND2Q8NDZ0 799 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ROBO4Q8WZ75 1007 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF764Q96H86 408 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF382Q96SR6 550 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PFDN5Q99471 154 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 EPYCQ99645 322 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MAP3K3Q99759 626 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 VRK1Q99986 396 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ACTR6Q9GZN1 396 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 SLC25A19Q9HC21 320 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PROK2Q9HC23 129 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RASL12Q9NYN1 266 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF226Q9NYT6 803 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 EXO1Q9UQ84 846 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF835Q9Y2P0 537 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CLCA3PQ9Y6N3 262 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TEX13CA0A0J9YWL9 993 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM210A6NLX4 147 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 L7N2F9 121 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RGS11O94810 467 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 AZGP1P25311 298 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CRISP3P54108 245 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MTPNP58546 118 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CSNK1G2P78368 415 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ACSM2AQ08AH3 577 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MAD2L1Q13257 205 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 MEDAGQ5VYS4 303 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ACSM2BQ68CK6 577 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 FJX1Q86VR8 437 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 C15orf54Q8N8G6 183 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 ATP6V1C2Q8NEY4 427 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 BPIFCQ8NFQ6 507 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 OR6K3Q8NGY3 331 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 OR10J5Q8NHC4 309 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PROKR1Q8TCW9 393 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 RXFP4Q8TDU9 374 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CNOT9Q92600 299 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 KAT2AQ92830 837 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 TEAD3Q99594 435 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 GGACTQ9BVM4 153 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 SORBS1Q9BX66 1292 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 PIGMQ9H3S5 423 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 STOX2Q9P2F5 926 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CES1P1Q9UKY3 287 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 APCP25054 2843 aa6.27□□□□□ -1.41
CSDE1-204ENST00000369530 CYSRT1A8MQ03 144 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ISM1B1AKI9 464 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 TCAPO15273 167 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 DUX1O43812 170 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PRAF2O60831 178 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RDH16O75452 317 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ITGA10O75578 1167 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 COX6A1P12074 109 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 RAB28P51157 221 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 MGAT2Q10469 447 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 GK2Q14410 553 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PCOLCEQ15113 449 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PRAMEF13Q5VWM6 474 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 HAGHLQ6PII5 290 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SIAH3Q8IW03 269 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 SLC34A3Q8N130 599 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 MOSPD2Q8NHP6 518 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PYURFQ96I23 114 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR52E6Q96RD3 313 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 OR51V1Q9H2C8 321 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 TUBA4BQ9H853 241 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 MIEF1Q9NQG6 463 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 VSX1Q9NZR4 365 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-204ENST00000369530 PLAGL1Q9UM63 463 aa6.26□□□□□ -1.41
CSDE1-204ENST00000369530 TRBV23OR9-2A0A075B6M9 112 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms