RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF226Q9NYT6 803 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 BLOC1S6Q9UL45 172 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 NOX1Q9Y5S8 564 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 DSPP15924 2871 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 SH3D21A4FU49 640 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 C11orf98E9PRG8 122 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 MS4A18H0YCH9 400 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 AQP7O14520 342 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 PRKYO43930 277 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 IGHMP01871 453 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 SFTPCP11686 197 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 CPN1P15169 458 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 EIF1AXP47813 144 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 DAP3P51398 398 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 SUCLG1P53597 346 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ERVK-25P63136 954 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TOP3AQ13472 1001 aaPredicted RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 OCLNQ16625 522 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 MS4A18Q3C1V0 323 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 RBM48Q5RL73 367 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 C6orf141Q5SZD1 244 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 FAM122BQ7Z309 247 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 SIAH3Q8IW03 269 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF786Q8N393 782 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 CNIH3Q8TBE1 160 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF566Q969W8 418 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TXNIPQ9H3M7 391 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF71Q9NQZ8 489 aaPredicted RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 MYRFQ9Y2G1 1151 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ADAM18Q9Y3Q7 739 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 LIPGQ9Y5X9 500 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ATMQ13315 3056 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 BOD1L1Q8NFC6 3051 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TPRP12270 2363 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.64
TUBE1-202ENST00000368662 ZZEF1O43149 2961 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 CCDC159P0C7I6 412 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 P2RY4P51582 365 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 CLDN15P56746 228 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 POU4F3Q15319 338 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 TMEM201Q5SNT2 666 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 SLC35F1Q5T1Q4 408 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 FAM205BPQ63HN1 556 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 FAM180AQ6UWF9 173 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 HDDC2Q7Z4H3 204 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 UEVLDQ8IX04 471 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 UBE2FQ969M7 185 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 SARAFQ96BY9 339 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 OXGR1Q96P68 337 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 IL4I1Q96RQ9 567 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 TIMP4Q99727 224 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.64
TUBE1-202ENST00000368662 ZMIZ1Q9ULJ6 1067 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 PCDHGB5Q9Y5G0 923 aa11.02□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF407Q9C0G0 2248 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 NPIPA5E9PKD4 350 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 H0YC42 278 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 XKRYO14609 159 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 CXCL13O43927 109 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 DNAJC13O75165 2243 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 WBP4O75554 376 aaKnown RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF43P17038 809 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 RPL27P61353 136 aaKnown RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 HSF1Q00613 529 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 POU3F1Q03052 451 aaPredicted RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 ACKR1Q16570 336 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 NADK2Q4G0N4 442 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 CHMP1BQ7LBR1 199 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 ADCK1Q86TW2 530 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 JAZF1Q86VZ6 243 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 CCDC103Q8IW40 242 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 PM20D2Q8IYS1 436 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 ARIH2OSQ8N7S6 290 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 LSM14AQ8ND56 463 aaKnown RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 APH1BQ8WW43 257 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 RFKQ969G6 155 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 LRR1Q96L50 414 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 TSPAN32Q96QS1 320 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 SRXN1Q9BYN0 137 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 SCN3BQ9NY72 215 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF346Q9UL40 294 aaKnown RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 MCTS1Q9ULC4 181 aaKnown RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 NPIPA1Q9UND3 350 aa11.02□□□□□ -0.65
TUBE1-202ENST00000368662 TLN1Q9Y490 2541 aaKnown RBP11.02□□□□□ -0.65
TUBE1-202ENST00000368662 BSNQ9UPA5 3926 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 TEX13CA0A0J9YWL9 993 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 MAGEA13PA6NCF6 341 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 OR14I1A6ND48 311 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 A6NIZ1 184 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 PRR23D1E9PI22 279 aaPredicted RBP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 M0R129 80 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 PRR23D2P0DMB1 279 aaPredicted RBP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 HIST1H1CP16403 213 aaKnown RBP11.01□□□□□ -0.65
TUBE1-202ENST00000368662 ACVR2AP27037 513 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 RAP1BP61224 184 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 RAP1AP62834 184 aa11.01□□□□□ -0.65
TUBE1-202ENST00000368662 SRYQ05066 204 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms