RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RAP2BP61225 183 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 EXT1Q16394 746 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ULK3Q6PHR2 472 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 RASSF6Q6ZTQ3 369 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 CCDC71Q8IV32 467 aaPredicted RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 CNIH3Q8TBE1 160 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 DNAJA4Q8WW22 397 aaPredicted RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 TMEM239Q8WW34 195 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 RADILQ96JH8 1075 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 PRSS27Q9BQR3 290 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 VCX3AQ9NNX9 186 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 CCNB1IP1Q9NPC3 277 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 NDUFA13Q9P0J0 144 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 ZNF223Q9UK11 482 aaPredicted RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 PADI1Q9ULC6 663 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 NTNG1Q9Y2I2 539 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 TPRKBQ9Y3C4 175 aa7.93□□□□□ -1.14
TPM3-213ENST00000368545 PTRH2Q9Y3E5 179 aaKnown RBP7.93□□□□□ -1.14
TPM3-213ENST00000368545 AHCTF1Q8WYP5 2266 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 HEATR5AQ86XA9 2040 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 C2CD3Q4AC94 2353 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 A0A1B0GWA3 101 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 A0A1W2PQ72 361 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 FAM90A20PA6NIJ5 464 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 ZNF264O43296 627 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 WIPF1O43516 503 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 MRPS14O60783 128 aaKnown RBP7.92□□□□□ -1.14
TPM3-213ENST00000368545 ICOSLGO75144 302 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 KLF7O75840 302 aaPredicted RBP7.92□□□□□ -1.14
TPM3-213ENST00000368545 ZFAND5O76080 213 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 OR6B1O95007 311 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 VSIG10L2P0DP72 767 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 NAGAP17050 411 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 POU1F1P28069 291 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 SKP2Q13309 424 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 ALG10BQ5I7T1 473 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 SLX4IPQ5VYV7 408 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 FAM199XQ6PEV8 388 aaPredicted RBP7.92□□□□□ -1.14
TPM3-213ENST00000368545 MISPQ8IVT2 679 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 NRMQ8IXM6 262 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 PRR22Q8IZ63 422 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 CDK20Q8IZL9 346 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 CLDN22Q8N7P3 220 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 TEX47Q8TBZ9 253 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 ZNF426Q9BUY5 554 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 TEX12Q9BXU0 123 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 TBL1XR1Q9BZK7 514 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 LAT2Q9GZY6 243 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 ENKD1Q9H0I2 346 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 AKIRIN1Q9H9L7 192 aaPredicted RBP7.92□□□□□ -1.14
TPM3-213ENST00000368545 MED31Q9Y3C7 131 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 CFAP46Q8IYW2 2715 aa7.92□□□□□ -1.14
TPM3-213ENST00000368545 IGHV1-45A0A0A0MS14 117 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SMIM31A0A1B0GVY4 71 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 HTR3EA5X5Y0 456 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 GTPBP1O00178 669 aaKnown RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 PRKNO60260 465 aaPredicted RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 EIF4E2O60573 245 aaKnown RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 LYPD3O95274 346 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SOX14O95416 240 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 TFAP2AP05549 437 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 UMODP07911 640 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 RNASE1P07998 156 aaKnown RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 LINGO3P0C6S8 592 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 EVI2BP34910 448 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SMSP52788 366 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 RRADP55042 308 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 DOC2BQ14184 412 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 CD226Q15762 336 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 TBCEQ15813 527 aaPredicted RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 C12orf73Q69YU5 71 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 RPL13AP3Q6NVV1 102 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 TMCO5AQ8N6Q1 288 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 RHOXF1Q8NHV9 184 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SLC22A8Q8TCC7 542 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 TRUB1Q8WWH5 349 aaKnown RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 OSTF1Q92882 214 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 NACC2Q96BF6 587 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 C8orf44Q96CB5 159 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 TMCO6Q96DC7 493 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SLC25A19Q9HC21 320 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 FLRT3Q9NZU0 649 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 RNF6Q9Y252 685 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SH3D21A4FU49 640 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 GZMKP49863 264 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 CTBP2P56545 445 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 PRKCDQ05655 676 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 WBP2NLQ6ICG8 309 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 LAIR2Q6ISS4 152 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 SLC27A4Q6P1M0 643 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 CASP12Q6UXS9 341 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 WDR88Q6ZMY6 472 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 ZNF620Q6ZNG0 422 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 Q6ZPB1 254 aaPredicted RBP7.91□□□□□ -1.14
TPM3-213ENST00000368545 CADM2Q8N3J6 435 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 POGLUT1Q8NBL1 392 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 NUDT10Q8NFP7 164 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 BPIFB6Q8NFQ5 453 aa7.91□□□□□ -1.14
TPM3-213ENST00000368545 M1APQ8TC57 530 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms