RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NACAE9PAV3 2078 aa2.25□□□□□ -2.05
ECHDC1-201ENST00000368287 OR5B21A6NL26 309 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 OR52A4PA6NMU1 304 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 GJE1A6NN92 205 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 C12orf77C9JDV5 145 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 HAS3O00219 553 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 TOM1O60784 492 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 KLF8O95600 359 aaPredicted RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 IGKV3-11P04433 115 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 CT62P0C5K7 136 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 FMO3P31513 532 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 HNRNPH3P31942 346 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 NUDT1P36639 197 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 RPS10P46783 165 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 CEBPDP49716 269 aaPredicted RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 ASPHQ12797 758 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 DDX39BQ13838 428 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 ATP6AP1Q15904 470 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNF77Q15935 545 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 ASCL5Q7RTU5 278 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 THOC6Q86W42 341 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 TPRX1Q8N7U7 411 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 FAM83FQ8NEG4 500 aaPredicted RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 OR13C2Q8NGS9 318 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 NDRG1Q92597 394 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 UCN3Q969E3 161 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 LRRC58Q96CX6 371 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 MS4A4EQ96PG1 132 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 TMEM246Q9BRR3 403 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 GIN1Q9NXP7 522 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 TMCO1Q9UM00 188 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 CACNG2Q9Y698 323 aa2.24□□□□□ -2.05
ECHDC1-201ENST00000368287 OR7A10O76100 309 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 MMP1P03956 469 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 IGHV4-34P06331 123 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 GIPP09681 153 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 UBTFL1P0CB47 393 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PSG2P11465 335 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 ICAM2P13598 275 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 IL12AP29459 219 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PBLDP30039 288 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PRDX3P30048 256 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 GLP1RP43220 463 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 CSNK1DP48730 415 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 ARRB1P49407 418 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 OGDHQ02218 1023 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 SCRN3Q0VDG4 424 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 KIAA0087Q14695 138 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PSG5Q15238 335 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 DGUOKQ16854 277 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 C6orf226Q5I0X4 101 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PSTKQ8IV42 348 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 NUDCD3Q8IVD9 361 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 OR2L3Q8NG85 312 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 ACER1Q8TDN7 264 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 TMEM158Q8WZ71 300 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 FGF14Q92915 247 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 IL22RA2Q969J5 263 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 FBXO32Q969P5 355 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PLEKHA8Q96JA3 519 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 CNN2Q99439 309 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 SLC25A39Q9BZJ4 359 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 OR11A1Q9GZK7 315 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 DEFB127Q9H1M4 99 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 SRMSQ9H3Y6 488 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 SIAEQ9HAT2 523 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 EML4Q9HC35 981 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNF331Q9NQX6 463 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 KCNIP1Q9NZI2 227 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 PISDQ9UG56 409 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 SUN2Q9UH99 717 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNF225Q9UK10 706 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 HPCAL4Q9UM19 191 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 TRAPPC4Q9Y296 219 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 TRIOBPQ9H2D6 2365 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 LRP4O75096 1905 aa2.23□□□□□ -2.05
ECHDC1-201ENST00000368287 IGKV1D-13A0A0B4J2D9 117 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 MAGEB4O15481 346 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 IGKV1-13P0DP09 117 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNF32P17041 273 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 CD1CP29017 333 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 LHX2P50458 406 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 CRISP3P54108 245 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 RABL6Q3YEC7 729 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 BOLA3Q53S33 107 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 CTSL3PQ5NE16 218 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 LCN12Q6JVE5 192 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 C6orf89Q6UWU4 347 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 LRRC31Q6UY01 552 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNF621Q6ZSS3 439 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 COX15Q7KZN9 410 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 H2BFWTQ7Z2G1 175 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 FAM71E2Q8N5Q1 922 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ACOT11Q8WXI4 607 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 SMARCD2Q92925 531 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 TUBGCP3Q96CW5 907 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 TM4SF19Q96DZ7 209 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 RNF185Q96GF1 192 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 OR2M2Q96R28 347 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 PELOQ9BRX2 385 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms