RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TGFB1P01137 390 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 LCATP04180 440 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GABRA3P34903 492 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 AHRP35869 848 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GPR3P46089 330 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 DAP3P51398 398 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 F2RL1P55085 397 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 FABP9Q0Z7S8 132 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GID4Q8IVV7 300 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GATSQ8NAP1 163 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OSTF1Q92882 214 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PITX2Q99697 317 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PINK1Q9BXM7 581 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 FAM234AQ9H0X4 552 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR6C3Q9NZP0 311 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GMPR2Q9P2T1 348 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ARAP2Q8WZ64 1704 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GXYLT2A0PJZ3 443 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR4C45A6NMZ5 311 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 METTL12A8MUP2 240 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 KLF11O14901 512 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 SMAD6O43541 496 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HPRP00739 348 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OPN1SWP03999 348 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CST2P09228 141 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 AMY2BP19961 511 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PTGER4P35408 488 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 TAGLN2P37802 199 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 RPL13AP40429 203 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GABARAPL2P60520 117 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ADIRFQ15847 76 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF8Q5VWM4 474 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PRAMEF7Q5VXH5 474 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 SFRP4Q6FHJ7 346 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PARM1Q6UWI2 310 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PRSS42Q7Z5A4 293 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 C11orf42Q8N5U0 333 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR9I1Q8NGQ6 314 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR13J1Q8NGT2 312 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR6N2Q8NGY6 317 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 SLC45A3Q96JT2 553 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF317Q96PQ6 595 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PARD6AQ9NPB6 346 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 H7BY64 318 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 CYR61O00622 381 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 TRAPPC2P0DI81 140 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 TRAPPC2BP0DI82 140 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 LMO2P25791 158 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 CRABP1P29762 137 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 TBC1D28Q2M2D7 210 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 CARD17Q5XLA6 110 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 NIPAL3Q6P499 406 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 ASRGL1Q7L266 308 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 AAED1Q7RTV5 226 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 ELP5Q8TE02 316 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 DCUN1D4Q92564 292 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 SGCZQ96LD1 299 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 PRAP1Q96NZ9 151 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 SLC35A5Q9BS91 424 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 SDCBP2Q9H190 292 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 IKZF4Q9H2S9 585 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 APMAPQ9HDC9 416 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 SLC6A20Q9NP91 592 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF701Q9NV72 531 aaPredicted RBP8.02□□□□□ -1.12
SYNE1-206ENST00000367253 UBE2J1Q9Y385 318 aaPredicted RBP8.02□□□□□ -1.12
SYNE1-206ENST00000367253 OR1A2Q9Y585 309 aa8.02□□□□□ -1.12
SYNE1-206ENST00000367253 MAST2Q6P0Q8 1798 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 HIDE1A8MVS5 230 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 LDLRAD4O15165 306 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 UPK1BO75841 260 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 OR2J2O76002 312 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 STK17BO94768 372 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 MYOGP15173 224 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 TNFRSF1AP19438 455 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SLC6A11P48066 632 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SPCS3P61009 180 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 JAG1P78504 1218 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 CDK6Q00534 326 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SPHARQ15513 63 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 TEX30Q5JUR7 227 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 WIPI1Q5MNZ9 446 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-206ENST00000367253 ALKAL2Q6UX46 152 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 HACD2Q6Y1H2 254 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 CEACAM19Q7Z692 300 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 LINC00518Q8N0U6 118 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 OR5AR1Q8NGP9 310 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 LHFPL5Q8TAF8 219 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 APH1AQ96BI3 265 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SOX17Q9H6I2 414 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-206ENST00000367253 KIF25Q9UIL4 384 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 TP53TG5Q9Y2B4 290 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 IGLV3-22A0A075B6J6 115 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 A0A1B0GX78 115 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 CRYM-AS1A6NIL9 109 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 ALG1L2C9J202 215 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 BLOC1S5-TXNDC5H3BN57 136 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms