RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TAS2R16Q9NYV7 291 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 LHX6Q9UPM6 363 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 DSCR3O14972 297 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 EIF4E2O60573 245 aaKnown RBP17.11■□□□□ 0.33
CLIP2-202ENST00000361545 SLC22A5O76082 557 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 TMEM71Q6P5X7 295 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 CYHR1Q6ZMK1 362 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 H1FNTQ75WM6 255 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-202ENST00000361545 FCRLAQ7L513 359 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 LRRC56Q8IYG6 542 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 PKMYT1Q99640 499 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 BCL7BQ9BQE9 202 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 CDHR4A6H8M9 788 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 OR2T7P0C7T2 308 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 GM2AP17900 193 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 SLC1A3P43003 542 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 CXADRP78310 365 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 TBCEQ15813 527 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-202ENST00000361545 AGAP7PQ5VUJ5 663 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 OR2T27Q8NH04 317 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 Q96M85 177 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 AGAP4Q96P64 663 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 C1QTNF6Q9BXI9 259 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 COQ3Q9NZJ6 369 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 P2RY10O00398 339 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 OR8U9P0C7N5 309 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 ADH6P28332 368 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 TEAD1P28347 426 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 IKZF1Q13422 519 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 PGM2L1Q6PCE3 622 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 NKAIN4Q8IVV8 208 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 CCDC28AQ8IWP9 274 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 SNAPC3Q92966 411 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 TP53TG5Q9Y2B4 290 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 SLC17A4Q9Y2C5 497 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 CACNG2Q9Y698 323 aa17.11■□□□□ 0.33
CLIP2-202ENST00000361545 C7orf72A4D263 438 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 OR2W5A6NFC9 320 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 I6L893 689 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 MBTPS2O43462 519 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF385BQ569K4 471 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 COMTD1Q86VU5 262 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 DNAJC22Q8N4W6 341 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 CMSS1Q9BQ75 279 aaKnown RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 NICN1Q9BSH3 213 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 WNT16Q9UBV4 365 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 TRBV5-4A0A0C4DH59 114 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 H0YIG0 161 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 ARPC1BO15143 372 aaKnown RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 DNAJB6O75190 326 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 RFC3P40938 356 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 MEP1BQ16820 701 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 HAGHLQ6PII5 290 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 OR2A1Q8NGT9 310 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 FAIMQ9NVQ4 179 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 AGTR1P30556 359 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 TRIM23P36406 574 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 ILKQ13418 452 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 DPCDQ9BVM2 203 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 PLEKHA3Q9HB20 300 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 R4GN57 208 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 HMGN4O00479 90 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 PRAMEF4O60810 478 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 FPR3P25089 353 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 ERP29P30040 261 aaKnown RBP17.1■□□□□ 0.33
CLIP2-202ENST00000361545 LSAMPQ13449 338 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 HTR4Q13639 388 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 NXNL2Q5VZ03 156 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 ADAMTS14Q8WXS8 1223 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 GHSRQ92847 366 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 TMEM106AQ96A25 262 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 MMP28Q9H239 520 aa17.1■□□□□ 0.33
CLIP2-202ENST00000361545 IL9P15248 144 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 CX3CR1P49238 355 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 ZNF707Q96C28 371 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 CHST8Q9H2A9 424 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 CHRNA9Q9UGM1 479 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 A0A0G2JMP0 313 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 M0R082 166 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 ZGLP1P0C6A0 271 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 IL7P13232 177 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 EIF2S3P41091 472 aaKnown RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 MPEG1Q2M385 716 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 SAXO2Q658L1 398 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 BPHLQ86WA6 291 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 OR4M2Q8NGB6 313 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 C22orf15Q8WYQ4 148 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 PAQR5Q9NXK6 330 aaPredicted RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 TMEM212A6NML5 194 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 CSO75390 466 aaKnown RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 VEGFCP49767 419 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 BDH1Q02338 343 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 BRIX1Q8TDN6 353 aaKnown RBP17.09■□□□□ 0.33
CLIP2-202ENST00000361545 NTNG1Q9Y2I2 539 aa17.09■□□□□ 0.33
CLIP2-202ENST00000361545 TIMM8BQ9Y5J9 83 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms