RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CSAG2Q9Y5P2 127 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 GPR171O14626 319 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SHC1P29353 583 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 EVX1P49640 407 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 GPR18Q14330 331 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 MBOAT2Q6ZWT7 520 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 HORMAD2Q8N7B1 307 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 UCN3Q969E3 161 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 NEURL3Q96EH8 262 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 MMABQ96EY8 250 aaPredicted RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 NIPSNAP1Q9BPW8 284 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SLCO3A1Q9UIG8 710 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 A0A1B0GTW7 788 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RNF212BA8MTL3 300 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RAD1O60671 282 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SLC6A8P48029 635 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF776Q68DI1 518 aaPredicted RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ABHD12BQ7Z5M8 362 aaPredicted RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RAB7BQ96AH8 199 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 UPRTQ96BW1 309 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SLIRPQ9GZT3 109 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 DCTN6O00399 190 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 PEX10O60683 326 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 MSMO1Q15800 293 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CSNK1A1LQ8N752 337 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ACVR1CQ8NER5 493 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 OR13C9Q8NGT0 318 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 PDCD1LG2Q9BQ51 273 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 LMF2Q9BU23 707 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 KATNB1Q9BVA0 655 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CHD3Q12873 2000 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ADAMTSL3P82987 1691 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 KDM4FA0A1W2PPD8 638 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 HIDE1A8MVS5 230 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SCO2O43819 266 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RNGTTO60942 597 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SPNP16150 400 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 BCKDHBP21953 392 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CLDN12P56749 244 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 UBE2IP63279 158 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 KCTD11Q693B1 232 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ESPNLQ6ZVH7 1005 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 OR51S1Q8NGJ8 323 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 GPR78Q96P69 363 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM59Q9BXS4 323 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 HAPLN2Q9GZV7 340 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 MED20Q9H944 212 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CREBZFQ9NS37 354 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF355PQ9NSJ1 428 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ACSS1Q9NUB1 689 aaPredicted RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ACAD8Q9UKU7 415 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RHBDD3Q9Y3P4 386 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 HLA-DOBP13765 273 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 FUT1P19526 365 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 PSMB3P49720 205 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 HNRNPKP61978 463 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 LCTLQ6UWM7 567 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 DBX2Q6ZNG2 339 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 PIANPQ8IYJ0 282 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SIDT1Q9NXL6 827 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 B4DGG1 531 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 OR13C7P0DN81 318 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 PHF19Q5T6S3 580 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 UEVLDQ8IX04 471 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 KREMEN2Q8NCW0 462 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF439Q8NDP4 499 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM18Q96B42 140 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 MED18Q9BUE0 208 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 NOX4Q9NPH5 578 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 NRAPQ86VF7 1730 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 ALS2Q96Q42 1657 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 C17orf112F2Z3M2 114 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 SGK494L7N484 410 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 HMGN2P05204 90 aaKnown RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 PFKMP08237 780 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 RPS21P63220 83 aaKnown RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 AQP6Q13520 282 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 OR1Q1Q15612 314 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 PRRT3Q5FWE3 981 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 MYO7BQ6PIF6 2116 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 OGFOD3Q6PK18 319 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 SCLYQ96I15 445 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 C8orf33Q9H7E9 229 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 A4GALTQ9NPC4 353 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 TRAPPC4Q9Y296 219 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 FOXE1O00358 373 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 TP53I11O14683 189 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 APOA2P02652 100 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 NAGAP17050 411 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 ARNTP27540 789 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 RFX2P48378 723 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 IQCJQ1A5X6 159 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 SEMA4CQ9C0C4 833 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 SPACA1Q9HBV2 294 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 INIPQ9NRY2 104 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 SPO11Q9Y5K1 396 aa8.15□□□□□ -1.1
COL6A6-201ENST00000358511 COL2A1P02458 1487 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-201ENST00000358511 ANTXRLA6NF34 631 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms