RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 HTR1EP28566 365 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 UQCRFS1P47985 274 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 DBPQ10586 325 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 SERPINA11Q86U17 422 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ADAMTS19Q8TE59 1207 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 LRRC15Q8TF66 581 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 ZNF599Q96NL3 588 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 CACNG6Q9BXT2 260 aa9.09□□□□□ -0.95
CHD3-202ENST00000358181 AKIRIN1Q9H9L7 192 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 ACSS1Q9NUB1 689 aaPredicted RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 INTS6Q9UL03 887 aaKnown RBP9.09□□□□□ -0.95
CHD3-202ENST00000358181 OR6C76A6NM76 312 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 CD40P25942 277 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 TGFBIQ15582 683 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 RTL8BQ17RB0 113 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 TSSK4Q6SA08 328 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 MOB1BQ7L9L4 216 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 DNAJC22Q8N4W6 341 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 NAT8LQ8N9F0 302 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 OR4Q3Q8NH05 313 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 HUS1BQ8NHY5 278 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 PIGTQ969N2 578 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.96
CHD3-202ENST00000358181 CLSTN3Q9BQT9 956 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 PITHD1Q9GZP4 211 aaPredicted RBP9.09□□□□□ -0.96
CHD3-202ENST00000358181 SIX4Q9UIU6 781 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 GAB2Q9UQC2 676 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 CSNK1G3Q9Y6M4 447 aa9.09□□□□□ -0.96
CHD3-202ENST00000358181 LRRC3CA6NJW4 275 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 TNFSF15O95150 251 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 NUDT3O95989 172 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 TNFRSF4P43489 277 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PPIAP62937 165 aaKnown RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 MEDAGQ5VYS4 303 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 AGBL5Q8NDL9 886 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 EDAQ92838 391 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ARRDC1-AS1Q9H2J1 176 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ATP13A2Q9NQ11 1180 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 GPR83Q9NYM4 423 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SLIT3O75094 1523 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PRAMEF25A6NGN4 478 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 CAPNS1P04632 268 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 AKAIN1P0CW23 69 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ICAM2P13598 275 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 MAP2K3P46734 347 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SLC6A8P48029 635 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 GNG10P50151 68 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PAGE3Q5JUK9 113 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PRAMEF5Q5TYX0 476 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PRAMEF6Q5VXH4 476 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 OR7E24Q6IFN5 339 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ADIPOR2Q86V24 386 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 LMNTD1Q8N9Z9 388 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ZNF596Q8TC21 504 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 MISP3Q96FF7 219 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 COPS3Q9UNS2 423 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ZNF814B7Z6K7 855 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 H3BNX3 289 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SULT1C2O00338 296 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 IL2RAP01589 272 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 CD38P28907 300 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 RBP2P50120 134 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 CXADRP78310 365 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SLC25A11Q02978 314 aaKnown RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 DUSP7Q16829 419 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 IFI44Q8TCB0 444 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 BRIX1Q8TDN6 353 aaKnown RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 GALNT9Q9HCQ5 603 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SQORQ9Y6N5 450 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 XRN1Q8IZH2 1706 aaKnown RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 XRCC2O43543 280 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 RGS11O94810 467 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 IGHEP01854 428 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 PRPS1P60891 318 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SNTB1Q13884 538 aaKnown RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 NADK2Q4G0N4 442 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 COQ5Q5HYK3 327 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 KIAA0930Q6ICG6 404 aaPredicted RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
CHD3-202ENST00000358181 OR51A4Q8NGJ6 313 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 OR51A2Q8NGJ7 313 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 UBTD2Q8WUN7 234 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 C11orf40Q8WZ69 217 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ZNF597Q96LX8 424 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ZCCHC4Q9H5U6 513 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 MSL2Q9HCI7 577 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 IGSF9Q9P2J2 1179 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 ENPP5Q9UJA9 477 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 URGCP-MRPS24S4R325 110 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 TMEM269A0A1B0GVZ9 245 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 M0R3H8 397 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 SPRY3O43610 288 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 KCNE1P15382 129 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 HOXD13P35453 343 aa9.08□□□□□ -0.96
CHD3-202ENST00000358181 IL10RAQ13651 578 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms