RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 KDM4EB2RXH2 506 aaPredicted RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 KRBOX1C9JBD0 128 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 MRPL33O75394 65 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 GLCEO94923 617 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 DDAH2O95865 285 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CD46P15529 392 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CHATP28329 748 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ALKBH1Q13686 389 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CRMP1Q14194 572 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 SAXO2Q658L1 398 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 VRK3Q8IV63 474 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 OR9K2Q8NGE7 335 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM106AQ96A25 262 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 AMBRA1Q9C0C7 1298 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 UBQLN3Q9H347 655 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 PDFQ9HBH1 243 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 EMC7Q9NPA0 242 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TSPAN11A1L157 253 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CYB5BO43169 146 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 RAD1O60671 282 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CSO75390 466 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 SCRG1O75711 98 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 UTS2O95399 124 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 SLC34A2O95436 690 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 LGI1O95970 557 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 HLA-DMAP28067 261 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 S100A7P31151 101 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 HOXD12P35452 270 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CLDN6P56747 220 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ISL1P61371 349 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ARG2P78540 354 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 MFGE8Q08431 387 aaPredicted RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 CATR1Q13166 79 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 HMGN3Q15651 99 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 EXOSC6Q5RKV6 272 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TANGO2Q6ICL3 276 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM207Q6UWW9 146 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 Q6ZPB1 254 aaPredicted RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ADIPOR2Q86V24 386 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 OR51D1Q8NGF3 324 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 GIMAP1Q8WWP7 306 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 OR14A2Q96R54 314 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 MAP3K3Q99759 626 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 PAPOLGQ9BWT3 736 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 BIN3Q9NQY0 253 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 B3GNT2Q9NY97 397 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 EHFQ9NZC4 300 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 EDARQ9UNE0 448 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ATG2BQ96BY7 2078 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TMED7-TICAM2A0A0A6YYA0 188 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 NUDT21O43809 227 aaKnown RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 F13BP05160 661 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 FOSL2P15408 326 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ALDH3B1P43353 468 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 FAM219BQ5XKK7 198 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 MEX3DQ86XN8 651 aaKnown RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF679Q8IYX0 411 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 BOLLQ8N9W6 283 aaKnown RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF740Q8NDX6 193 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SPPL3Q8TCT6 385 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 MSI2Q96DH6 328 aaKnown RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 BTF3L4Q96K17 158 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 C1orf123Q9NWV4 160 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 TMED7Q9Y3B3 224 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 TRIOBPQ9H2D6 2365 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 HSPB2A8KAH6 182 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF780AO75290 641 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 CRYZL1O95825 349 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 RAF1P04049 648 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 CHRM2P08172 466 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 CPT2P23786 658 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 GABRR1P24046 479 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SLC35A2P78381 396 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 HSPB2Q16082 182 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF684Q5T5D7 378 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SLC16A14Q7RTX9 510 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 LILRA3Q8N6C8 439 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ACBD4Q8NC06 268 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 LILRB4Q8NHJ6 448 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF681Q96N22 645 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 GABARAPL3Q9BY60 117 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 C19orf53Q9UNZ5 99 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-202ENST00000357250 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 CA5BQ9Y2D0 317 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SNX11Q9Y5W9 270 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 PLSCR5A0PG75 271 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 E9PI62 339 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 NAGAP17050 411 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 OR1D4P47884 311 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SSR4P51571 173 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 STEAP3Q658P3 488 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 C18orf63Q68DL7 685 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 WDR5BQ86VZ2 330 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 SVBPQ8N300 66 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 RLN3Q8WXF3 142 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 PSMF1Q92530 271 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 BORCS7Q96B45 105 aa10.86□□□□□ -0.67
COL9A1-202ENST00000357250 RAB3CQ96E17 227 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms