RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 AQP11Q8NBQ7 271 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 OR9Q2Q8NGE9 314 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 OR51A7Q8NH64 312 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 OR5K1Q8NHB7 308 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 TMEM45BQ96B21 275 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 STARD4Q96DR4 205 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 PLSCR4Q9NRQ2 329 aa13.82□□□□□ -0.2
TRIM13-201ENST00000356017 PDP1Q9P0J1 537 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-201ENST00000356017 RRP15Q9Y3B9 282 aaKnown RBP13.82□□□□□ -0.2
TRIM13-201ENST00000356017 CLEC18AA5D8T8 446 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 AKAP8O43823 692 aaKnown RBP13.81□□□□□ -0.2
TRIM13-201ENST00000356017 MRPL33O75394 65 aaKnown RBP13.81□□□□□ -0.2
TRIM13-201ENST00000356017 GASTP01350 101 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 CD8BP10966 210 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 ANXA8P13928 327 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 GSTM3P21266 225 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 UQCRC1P31930 480 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 AQP2P41181 271 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 GSSP48637 474 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-201ENST00000356017 LAPTM4AQ15012 233 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 ALG10Q5BKT4 473 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 CLEC18BQ6UXF7 455 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 AMIGO2Q86SJ2 522 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 MEX3DQ86XN8 651 aaKnown RBP13.81□□□□□ -0.2
TRIM13-201ENST00000356017 ZDHHC13Q8IUH4 622 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 EPHX4Q8IUS5 362 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 SVOPLQ8N434 492 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 CLEC18CQ8NCF0 446 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 OR13C2Q8NGS9 318 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 SSC4DQ8WTU2 575 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 ITLN2Q8WWU7 325 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-201ENST00000356017 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-201ENST00000356017 TNFRSF13CQ96RJ3 184 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 DGCR6LQ9BY27 220 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 PROCRQ9UNN8 238 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 SIGLEC7Q9Y286 467 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 ARHGAP21Q5T5U3 1957 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 MPDZO75970 2070 aa13.81□□□□□ -0.2
TRIM13-201ENST00000356017 KIAA1549Q9HCM3 1950 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 TRAV27A0A087WT01 109 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 A0A1W2PRG6 482 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 C11orf98E9PRG8 122 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 G3V2T6 193 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 MSTNO14793 375 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 PTP4A3O75365 173 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 HPRP00739 348 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 ADAP00813 363 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 COX10Q12887 443 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 RPL13AP3Q6NVV1 102 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 VWA1Q6PCB0 445 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 BTLAQ7Z6A9 289 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 LIX1LQ8IVB5 337 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 ZIC4Q8N9L1 334 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 LRRC46Q96FV0 321 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 FEVQ99581 238 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 GPA33Q99795 319 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 ZNF556Q9HAH1 456 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 INIPQ9NRY2 104 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 RCE1Q9Y256 329 aa13.8□□□□□ -0.2
TRIM13-201ENST00000356017 NPIPB13A6NJU9 1138 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 OR6C65A6NJZ3 312 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 NPIPB4C9JG80 1138 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 TRAF3IP2O43734 574 aaPredicted RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 SMNDC1O75940 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 CLDN14O95500 239 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 CGAP01215 116 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 HLA-DOBP13765 273 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 POU2F1P14859 743 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 ZNF23P17027 643 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 MYO7BQ6PIF6 2116 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 CD300LDQ6UXZ3 194 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 AAED1Q7RTV5 226 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 NUFIP2Q7Z417 695 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 HDDC2Q7Z4H3 204 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 ZNF100Q8IYN0 542 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 DNAJC9Q8WXX5 260 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 APH1AQ96BI3 265 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 ADAD1Q96M93 576 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 ZNF385AQ96PM9 386 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 PKP2Q99959 881 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 SEMA6AQ9H2E6 1030 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 C12orf49Q9H741 205 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 KCNJ16Q9NPI9 418 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 EEF1E1-BLOC1S5C9J1V9 151 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 EEF1E1O43324 174 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 SERPINI2O75830 405 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 NDUFB2O95178 105 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 CNOT4O95628 575 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 F13BP05160 661 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 RPL4P36578 427 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 OR3A2P47893 321 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 DAP3P51398 398 aaKnown RBP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 CLDN17P56750 224 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 SRSF1Q07955 248 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM13-201ENST00000356017 FHL1Q13642 323 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 HMBOX1Q6NT76 420 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 SMARCD3Q6STE5 483 aa13.79□□□□□ -0.2
TRIM13-201ENST00000356017 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms