RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RBBP4Q09028 425 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 VEZF1Q14119 521 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 MST1LQ2TV78 715 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 KRTAP21-3Q3LHN1 58 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 ENTPD8Q5MY95 495 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 REP15Q6BDI9 236 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 RNF217Q8TC41 542 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 TSPEARQ8WU66 669 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 DNAJA4Q8WW22 397 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC47A1Q96FL8 570 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF607Q96SK3 696 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 DHRS9Q9BPW9 319 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 PRSS27Q9BQR3 290 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 LINC00470Q9BZP3 86 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 GRIP2Q9C0E4 1043 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 NOX3Q9HBY0 568 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 GPR35Q9HC97 309 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 TRIM33Q9UPN9 1127 aa14.58□□□□□ -0.08
PDLIM7-201ENST00000355572 NIPBLQ6KC79 2804 aaeCLIP14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 PRORSD1PA6NEY8 169 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 INAFM1C9JVW0 142 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF587BE7ETH6 402 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 LY6HO94772 140 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF43P17038 809 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 PCSK6P29122 969 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 CALCRP30988 508 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 VMACQ2NL98 169 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 CEACAM16Q2WEN9 425 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 TRMT5Q32P41 509 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 CARD17Q5XLA6 110 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 KLHL17Q6TDP4 642 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 H1FNTQ75WM6 255 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 TMEM27Q9HBJ8 222 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 CBLN4Q9NTU7 201 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 POU2F3Q9UKI9 436 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 MGAT4BQ9UQ53 548 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 RCE1Q9Y256 329 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 ATP23Q9Y6H3 246 aa14.57□□□□□ -0.08
PDLIM7-201ENST00000355572 ABCA1O95477 2261 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 IGHV4-30-2A0A087WSY4 118 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 RPL36A-HNRNPH2H7BZ11 118 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 SHOX2O60902 331 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 SERPINB7O75635 380 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 PRPS1P60891 318 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 NCALDP61601 193 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 METTL21CQ5VZV1 264 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 SNX32Q86XE0 403 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 PRIMA1Q86XR5 153 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 MUC15Q8N387 334 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 LRRC17Q8N6Y2 441 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 ADPRHL1Q8NDY3 354 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 ADAMTS16Q8TE57 1224 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 LRRC58Q96CX6 371 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 TRMT61AQ96FX7 289 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 RADILQ96JH8 1075 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC38A2Q96QD8 506 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 SIKE1Q9BRV8 207 aa14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 CRNNQ9UBG3 495 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-201ENST00000355572 ARPC4-TTLL3A0A0A6YYG9 625 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 LOC102725191A0A1B0GVB3 256 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC35F4A4IF30 521 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 PLPP3O14495 311 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 CHP2O43745 196 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 OR2T1O43869 369 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 SSX4O60224 188 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 SERPINI2O75830 405 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 KRT33AO76009 404 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 CECR9P0C854 216 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 GTF2E2P29084 291 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 FABP6P51161 128 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 ARFIP2P53365 341 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 POU3F1Q03052 451 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 TGFBR3Q03167 851 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 AGAP6Q5VW22 663 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 CCDC80Q76M96 950 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 SSX8Q7RTT4 187 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 RANBP3LQ86VV4 465 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 POU5F2Q8N7G0 328 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 OR6S1Q8NH40 331 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 C10orf82Q8WW14 230 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF583Q96ND8 569 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 TMEM43Q9BTV4 400 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 REG4Q9BYZ8 158 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 ALG2Q9H553 416 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 CRLF2Q9HC73 371 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 MRPL39Q9NYK5 338 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 ZNF224Q9NZL3 707 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 ARMCX1Q9P291 453 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC7A7Q9UM01 511 aa14.55□□□□□ -0.08
PDLIM7-201ENST00000355572 LOC100653049A0A140TA62 436 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 C11orf98E9PRG8 122 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 M0R3G1 203 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 KPNA4O00629 521 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 MRASO14807 208 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 RRP9O43818 475 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 GPRIN2O60269 458 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 FMO6PO60774 539 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 SLC43A1O75387 559 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 KRT34O76011 436 aa14.54□□□□□ -0.08
PDLIM7-201ENST00000355572 IGLV1-44P01699 117 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms