RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 DIRAS2Q96HU8 199 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 MS4A4EQ96PG1 132 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 FGF23Q9GZV9 251 aaPredicted RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 REEP4Q9H6H4 257 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SIDT1Q9NXL6 827 aaKnown RBP5.03□□□□□ -1.6
CD47-201ENST00000355354 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SRPK3Q9UPE1 567 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 RCE1Q9Y256 329 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 COMMD10Q9Y6G5 202 aa5.03□□□□□ -1.6
CD47-201ENST00000355354 SYCE1LA8MT33 242 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 NOTOA8MTQ0 251 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 RPS3P23396 243 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD47-201ENST00000355354 FHL5Q5TD97 284 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 LYSMD4Q5XG99 296 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 KRT74Q7RTS7 529 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ADCK2Q7Z695 626 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 APLFQ8IW19 511 aaPredicted RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 KLHL36Q8N4N3 616 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 NKAPQ8N5F7 415 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 GOT1L1Q8NHS2 421 aaPredicted RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 MIPOL1Q8TD10 442 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 SMPDL3AQ92484 453 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 C1orf147Q96MC9 270 aaPredicted RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 IP6K3Q96PC2 410 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ABCG5Q9H222 651 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 FBXO44Q9H4M3 255 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 C12orf4Q9NQ89 552 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 MAGEL2Q9UJ55 1249 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 TMCC3Q9ULS5 477 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 TMED7Q9Y3B3 224 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 GMEB1Q9Y692 573 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 H0YJX3 145 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ABHD16AO95870 558 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 HLA-DPB1P04440 258 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 C1GALT1C1LP0DN25 315 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 CTLA4P16410 223 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 SLC2A5P22732 501 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 PAX6P26367 422 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 CD27P26842 260 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 MANFP55145 182 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 ERVK-25P63136 954 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 TRIP6Q15654 476 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 HNRNPA1L2Q32P51 320 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 ZNF684Q5T5D7 378 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ZNF620Q6ZNG0 422 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 SLC37A2Q8TED4 501 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 NUDT22Q9BRQ3 303 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 WDR12Q9GZL7 423 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 NXF5Q9H1B4 397 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 SMURF1Q9HCE7 757 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ANKHQ9HCJ1 492 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ATP6V1HQ9UI12 483 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ZNF337Q9Y3M9 751 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ANXA2P2A6NMY6 339 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 M0QYG6 137 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 RGS13O14921 159 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 RDH16O75452 317 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 TMEM50AO95807 157 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 MTNR1AP48039 350 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 LGALS4P56470 323 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 SNX16P57768 344 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 IRF4Q15306 451 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 GRK1Q15835 563 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 PCK2Q16822 640 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 KLHL12Q53G59 568 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 HEPHL1Q6MZM0 1159 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 OGFOD3Q6PK18 319 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 RABEPKQ7Z6M1 372 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ODF3L1Q8IXM7 274 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 NPEPL1Q8NDH3 523 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 OR2L3Q8NG85 312 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 OR51D1Q8NGF3 324 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ANKRD9Q96BM1 317 aaPredicted RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 NEURL3Q96EH8 262 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 HDAC8Q9BY41 377 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 REEP1Q9H902 201 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 DNAJC11Q9NVH1 559 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 PLA2G3Q9NZ20 509 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 OR5V1Q9UGF6 321 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 PCDHGB3Q9Y5G1 929 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 FAM221AA4D161 298 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 NDUFS4O43181 175 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ADH1CP00326 375 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 HOXC4P09017 264 aaPredicted RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 SLC26A3P40879 764 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 AQP2P41181 271 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 MECP2P51608 486 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 NUP107P57740 925 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 HFEQ30201 348 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 TRIM61Q5EBN2 209 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ZNF529Q6P280 563 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 GALNT7Q86SF2 657 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ZNF614Q8N883 585 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 EXD3Q8N9H8 876 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 OR13C8Q8NGS7 320 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ZCCHC14Q8WYQ9 949 aaKnown RBP5.02□□□□□ -1.61
CD47-201ENST00000355354 ISOC2Q96AB3 205 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 PCDHGB7Q9Y5F8 929 aa5.02□□□□□ -1.61
CD47-201ENST00000355354 ARGFXA6NJG6 315 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms