RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 OR1D5P58170 312 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 RPL18Q07020 188 aaKnown RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 UBE2NLQ5JXB2 153 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 SNAP47Q5SQN1 464 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 D2HGDHQ8N465 521 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 ZNF511Q8NB15 262 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 HLA-CQ95604 372 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 KTI12Q96EK9 354 aaPredicted RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 SHDQ96IW2 340 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 BEX2Q9BXY8 128 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 DPAGT1Q9H3H5 408 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 CCDC86Q9H6F5 360 aaKnown RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 SLA2Q9H6Q3 261 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 COPZ2Q9P299 210 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 A0A1B0GVT2 93 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 AGRPO00253 132 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 ITGA10O75578 1167 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 PIAS2O75928 621 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 RENP00797 406 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 ATXN8OSP0DMR3 200 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 FBLP22087 321 aaKnown RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 CXCR1P25024 350 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 EBPQ15125 230 aaKnown RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 PTCRAQ6ISU1 281 aaPredicted RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 UTS2BQ765I0 119 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 SYT9Q86SS6 491 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 YIPF5Q969M3 257 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 TMEM246Q9BRR3 403 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 NUDT9Q9BW91 350 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 DHCR7Q9UBM7 475 aaKnown RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 FAM171A2A8MVW0 826 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 HCRTR2O43614 444 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 GSTZ1O43708 216 aaPredicted RBP20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 DUX1O43812 170 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 CDC40O60508 579 aaKnown RBP eCLIP20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 C1QBP02746 253 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 F13BP05160 661 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 TCEA1P23193 301 aaKnown RBP20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 ZNF117Q03924 483 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 YOD1Q5VVQ6 348 aaPredicted RBP20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 LYPD4Q6UWN0 246 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 TIGD4Q8IY51 512 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 OR1L3Q8NH93 324 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 TAAR8Q969N4 342 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 UCKL1Q9NWZ5 548 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 WNT16Q9UBV4 365 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 COPS7AQ9UBW8 275 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 NUBP2Q9Y5Y2 271 aa20.23■□□□□ 0.83
NKX2-1-201ENST00000354822 ALG1L2C9J202 215 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 NDUFB5O43674 189 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 TSPAN2O60636 221 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 ZFPL1O95159 310 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 MAPK3P27361 379 aaPredicted RBP20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 MAB21L1Q13394 359 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 NSDHLQ15738 373 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 OR4D9Q8NGE8 314 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 C1orf216Q8TAB5 229 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 SRA1Q9HD15 236 aaKnown RBP20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 SEMA5BQ9P283 1151 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 PCDHGA9Q9Y5G4 932 aaKnown RBP20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 TMEM14AQ9Y6G1 99 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 PCDH15Q96QU1 1955 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 TMEM72A0PK05 275 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 AIPO00170 330 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 PIN1P1O15428 100 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 PGCP20142 388 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 NANOS3P60323 173 aaKnown RBP20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 FAPQ12884 760 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 SLC29A4Q7RTT9 530 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 CDC20BQ86Y33 519 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 PRR22Q8IZ63 422 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 ZFP3Q96NJ6 502 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 TSSK2Q96PF2 358 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 DERL3Q96Q80 235 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 TSPAN32Q96QS1 320 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 GFM1Q96RP9 751 aaKnown RBP20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 CLEC4AQ9UMR7 237 aa20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 MRPS7Q9Y2R9 242 aaKnown RBP20.22■□□□□ 0.83
NKX2-1-201ENST00000354822 TRAV36DV7A0A075B6V5 113 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 OR6C76A6NM76 312 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 IFITM5A6NNB3 132 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 ITPKBP27987 946 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 BTCP35070 178 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 GZMKP49863 264 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 NR0B1P51843 470 aaKnown RBP20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 PNLIPRP2P54317 469 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 ZP2Q05996 745 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 ALKBH1Q13686 389 aaKnown RBP20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 TBL1XR1Q9BZK7 514 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 SLITRK2Q9H156 845 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 MCUBQ9NWR8 336 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 AKAP7Q9P0M2 348 aaPredicted RBP20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 HSPB2A8KAH6 182 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 IDSB3KWA1 339 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 GRPRP30550 384 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 GPLD1P80108 840 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 EGR3Q06889 387 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 DYRK1AQ13627 763 aa20.21■□□□□ 0.83
NKX2-1-201ENST00000354822 HSPB2Q16082 182 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms