RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CDS1Q92903 461 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 CAPNS2Q96L46 248 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 TNFRSF13CQ96RJ3 184 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 PAPOLGQ9BWT3 736 aaKnown RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 LGR4Q9BXB1 951 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 BARX1Q9HBU1 254 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 MRPL17Q9NRX2 175 aaKnown RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 TAS2R8Q9NYW2 309 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 SPG21Q9NZD8 308 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF443Q9Y2A4 671 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-201ENST00000352993 SCN3AQ9NY46 2000 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 PLXNA3P51805 1871 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 SCN2AQ99250 2005 aa7.01□□□□□ -1.29
BRCA1-201ENST00000352993 KIAA1671Q9BY89 1806 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 GXYLT2A0PJZ3 443 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM189-UBE2V1I3L0A0 370 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 PIN1P1O15428 100 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 EMC8O43402 210 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 OIP5O43482 229 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 EOMESO95936 686 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 CD2P06729 351 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 DCNP07585 359 aaKnown RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 CPT2P23786 658 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 PPP2CBP62714 309 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 PPP2CAP67775 309 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 IL10RAQ13651 578 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 NKAPLQ5M9Q1 402 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 C11orf87Q6NUJ2 197 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ACOT7LQ6ZUV0 252 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 USP53Q70EK8 1073 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 HTR3DQ70Z44 454 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 RHOUQ7L0Q8 258 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF227Q86WZ6 799 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 SLC16A11Q8NCK7 471 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 OR1J2Q8NGS2 313 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 MIB2Q96AX9 1013 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 JAM3Q9BX67 310 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ATG5Q9H1Y0 275 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 OR51M1Q9H341 326 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 CLDND1Q9NY35 253 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF780BQ9Y6R6 833 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 M0R036 132 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 RNGTTO60942 597 aaKnown RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 GLSO94925 669 aaPredicted RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 F3P13726 295 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 IL9P15248 144 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 SPI1P17947 270 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ABCD3P28288 659 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 OR2B8PP59922 312 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 PLA2G7Q13093 441 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 FAM110CQ1W6H9 321 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 FAM220AQ7Z4H9 259 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 TMCO2Q7Z6W1 182 aaPredicted RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 TMEM151BQ8IW70 566 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 LILRB2Q8N423 598 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 OR6N1Q8NGY5 312 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 NUBPLQ8TB37 319 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 DCUN1D4Q92564 292 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 TFGQ92734 400 aaPredicted RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 ZBTB8AQ96BR9 441 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 WDR34Q96EX3 536 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 LMF1Q96S06 567 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 C19orf43Q9BQ61 176 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 IER2Q9BTL4 223 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF350Q9GZX5 532 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 KCNK15Q9H427 330 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ZMAT3Q9HA38 289 aaKnown RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 UQCC1Q9NVA1 299 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF281Q9Y2X9 895 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 H7C417 338 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 ASGR1P07306 291 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 SNRNP70P08621 437 aaKnown RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 RNF224P0DH78 156 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 GPR143P51810 404 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 EPHB3P54753 998 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 RAB2AP61019 212 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 DUSP2Q05923 314 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 HABP2Q14520 560 aaPredicted RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 OR1Q1Q15612 314 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ACER2Q5QJU3 275 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ADAM5Q6NVV9 412 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 C3orf33Q6P1S2 294 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ETV3LQ6ZN32 361 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF676Q8N7Q3 588 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 CYB5D2Q8WUJ1 264 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 NKD1Q969G9 470 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 CNRIP1Q96F85 164 aaPredicted RBP7□□□□□ -1.29
BRCA1-201ENST00000352993 TCEAL7Q9BRU2 100 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 POTEKPQ9BYX7 375 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 SMCO4Q9NRQ5 59 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 NCDNQ9UBB6 729 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 MTFP1Q9UDX5 166 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 ATG4BQ9Y4P1 393 aa7□□□□□ -1.29
BRCA1-201ENST00000352993 NEDD8-MDP1E9PL57 170 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 OGG1O15527 345 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF208O43345 1280 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 ZNF749O43361 778 aa6.99□□□□□ -1.29
BRCA1-201ENST00000352993 PMS2P2O95744 297 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms