RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 KLHDC2Q9Y2U9 406 aa22.38■■□□□ 1.17
CPNE1-202ENST00000352393 SERINC4A6NH21 518 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 FAM171A2A8MVW0 826 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 UPK3AO75631 287 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 PTHLHP12272 177 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 ADRA2CP18825 462 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 DCTDP32321 178 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 CDKN2AP42771 156 aaKnown RBP22.37■■□□□ 1.17
CPNE1-202ENST00000352393 SLC25A1P53007 311 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 RAB14P61106 215 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 PPP1CAP62136 330 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 SRSF5Q13243 272 aaKnown RBP22.37■■□□□ 1.17
CPNE1-202ENST00000352393 OPCMLQ14982 345 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 MFSD13AQ14CX5 517 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 Q499Y3 187 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 PARM1Q6UWI2 310 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 DNM1P46Q6ZS02 220 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 SLC16A9Q7RTY1 509 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 Q96M85 177 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 RPP25Q9BUL9 199 aaKnown RBP22.37■■□□□ 1.17
CPNE1-202ENST00000352393 G6PC3Q9BUM1 346 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 HRASLS2Q9NWW9 162 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 LRIT1Q9P2V4 623 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 CPNE7Q9UBL6 633 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 SPEF1Q9Y4P9 236 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 TP53BP1Q12888 1972 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-202ENST00000352393 A0A1W2PPL8 197 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 PLSCR5A0PG75 271 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 LDOC1O95751 146 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-202ENST00000352393 OR8G3PP0DMU2 310 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 ART1P52961 327 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 TAS2R20P59543 309 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 ZNF626Q68DY1 528 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 FAAP20Q6NZ36 180 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 TMEM65Q6PI78 240 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 ZNF511Q8NB15 262 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 OMA1Q96E52 524 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 Q9N2J8 555 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 SCML1Q9UN30 329 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 PCDHGA5Q9Y5G8 931 aa22.37■■□□□ 1.17
CPNE1-202ENST00000352393 MPDZO75970 2070 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 TRBV5-5A0A0J9YX44 114 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 OR2M5A3KFT3 312 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 NDUFB6O95139 128 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ABHD16AO95870 558 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ALDOBP05062 364 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 IL5P05113 134 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 CA3P07451 260 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 CTSBP07858 339 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 HNRNPA2B1P22626 353 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 UBE2IP63279 158 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 FAM122BQ7Z309 247 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 LRRTM1Q86UE6 522 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 HMGB4Q8WW32 186 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ELSPBP1Q96BH3 223 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 SIPA1Q96FS4 1042 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 TCF7L1Q9HCS4 588 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 WBP1LQ9NX94 342 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ZNF69Q9UC07 566 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 MRM2Q9UI43 246 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ZNF346Q9UL40 294 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 CDH23Q9H251 3354 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 CTNSO60931 367 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 SERPINI2O75830 405 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 CXCL2P19875 107 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ANXA7P20073 488 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 MAPK3P27361 379 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 ALKBH1Q13686 389 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 NNATQ16517 81 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 FAM220AQ7Z4H9 259 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 KCTD20Q7Z5Y7 419 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 SFTPA2Q8IWL1 248 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 DND1Q8IYX4 353 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 OR4C3Q8NH37 302 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 C15orf40Q8WUR7 153 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 RBM18Q96H35 190 aaKnown RBP22.36■■□□□ 1.17
CPNE1-202ENST00000352393 SLITRK2Q9H156 845 aa22.36■■□□□ 1.17
CPNE1-202ENST00000352393 TRANK1O15050 2925 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 TMEM72A0PK05 275 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 SNRPGP15A8MWD9 76 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 CREBL2O60519 120 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-202ENST00000352393 OR2A4O95047 310 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 RPP14O95059 124 aaKnown RBP22.35■■□□□ 1.17
CPNE1-202ENST00000352393 HRGP04196 525 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 TACSTD2P09758 323 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 CT45A8P0DMV1 189 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 CT45A9P0DMV2 189 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 C4BPBP20851 252 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 RAP2BP61225 183 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 DEFB110Q30KQ9 67 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 CT45A2Q5DJT8 189 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 ADGRG3Q86Y34 549 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 SPERTQ8NA61 448 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 LRRC75AQ8NAA5 344 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 OR5AK2Q8NH90 309 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 WBP1Q96G27 269 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 MSANTD3Q96H12 275 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 OR2A7Q96R45 310 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 FAM60AQ9NP50 221 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 KIF25Q9UIL4 384 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms