RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 MORN4Q8NDC4 146 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 PAPOLGQ9BWT3 736 aaKnown RBP12.57□□□□□ -0.4
SMC6-201ENST00000351948 HCAR1Q9BXC0 346 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 WWTR1Q9GZV5 400 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 MED29Q9NX70 200 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 ENPP5Q9UJA9 477 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 COA3Q9Y2R0 106 aaPredicted RBP12.57□□□□□ -0.4
SMC6-201ENST00000351948 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 MAGEB4O15481 346 aaPredicted RBP12.57□□□□□ -0.4
SMC6-201ENST00000351948 DUSP8Q13202 625 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 AGERQ15109 404 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 AGAP7PQ5VUJ5 663 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 PLCXD3Q63HM9 321 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 C3orf33Q6P1S2 294 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 SSX6Q7RTT6 188 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 GLB1L2Q8IW92 636 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 AGAP4Q96P64 663 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 CORINQ9Y5Q5 1042 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.56□□□□□ -0.4
SMC6-201ENST00000351948 EIF4E2O60573 245 aaKnown RBP12.56□□□□□ -0.4
SMC6-201ENST00000351948 SFTPBP07988 381 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 MAP2K3P46734 347 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
SMC6-201ENST00000351948 RBPJQ06330 500 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 TRIP6Q15654 476 aaKnown RBP12.56□□□□□ -0.4
SMC6-201ENST00000351948 H1FNTQ75WM6 255 aaPredicted RBP12.56□□□□□ -0.4
SMC6-201ENST00000351948 SPERTQ8NA61 448 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 OCIAD1Q9NX40 245 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 EPHA2P29317 976 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■□□□□ 11.3
SMC6-201ENST00000351948 DPY19L2P2Q6ZN68 376 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 CMIPQ8IY22 773 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 SIMC1Q8NDZ2 872 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 GHSRQ92847 366 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 SLC38A1Q9H2H9 487 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 C1orf198Q9H425 327 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 METTL15A6NJ78 407 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 SERPINA2P20848 420 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 PTH2RP49190 550 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 DUSP2Q05923 314 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 SPCS2Q15005 226 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 SCGB3A2Q96PL1 93 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 ST6GALNAC5Q9BVH7 336 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 S1PR5Q9H228 398 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 YARS2Q9Y2Z4 477 aaKnown RBP12.56□□□□□ -0.4
SMC6-201ENST00000351948 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 PLSCR5A0PG75 271 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 AKR1C4P17516 323 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 FXYD4P59646 89 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 NTRK2Q16620 822 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 HES3Q5TGS1 186 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 TMEM244Q5VVB8 128 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 CORO6Q6QEF8 472 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 MOB3CQ70IA8 216 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 VASH2Q86V25 355 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 TOMM40LQ969M1 308 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 OR10A4Q9H209 315 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 APMAPQ9HDC9 416 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 REV1Q9UBZ9 1251 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 PSORS1C1Q9UIG5 152 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 DUSP13Q9UII6 198 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 B3GNT3Q9Y2A9 372 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 MEMO1Q9Y316 297 aa12.56□□□□□ -0.4
SMC6-201ENST00000351948 TDRD6O60522 2096 aaKnown RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 CNOT4O95628 575 aaKnown RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 PRR35P0CG20 571 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 CLDN6P56747 220 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 RNASE10Q5GAN6 216 aaKnown RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 TAAR9Q96RI9 348 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 FBXO34Q9NWN3 711 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 PCYT1BQ9Y5K3 369 aaPredicted RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 CTDSP2O14595 271 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 CXCL13O43927 109 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 AMY2AP04746 511 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 THBS1P07996 1170 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 KIRREL2Q6UWL6 708 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 BATF2Q8N1L9 274 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 OR5D14Q8NGL3 314 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 MFSD8Q8NHS3 518 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 EMC7Q9NPA0 242 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 A0A087WV62 115 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 SPAARA0A1B0GVQ0 90 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 STMND1H3BQB6 276 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 GABRPO00591 440 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 HPGDSO60760 199 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 TFAP2AP05549 437 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 ARSBP15848 533 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 RBMXP38159 391 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms