RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 BCL2L15Q5TBC7 163 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 QSOX2Q6ZRP7 698 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 CADM4Q8NFZ8 388 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 ZFAND1Q8TCF1 268 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 FGF11Q92914 225 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 SYT4Q9H2B2 425 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 RASD1Q9Y272 281 aa12.67□□□□□ -0.38
TRIM4-201ENST00000349062 FER1L5A0AVI2 2057 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 FREM3P0C091 2139 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 CDKN2AP42771 156 aaKnown RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 CLDN6P56747 220 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 MAB21L1Q13394 359 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 MELKQ14680 651 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 INPP5JQ15735 1006 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 TMEM91Q6ZNR0 172 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 HSD17B8Q92506 261 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 OR14A2Q96R54 314 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 NPAS1Q99742 590 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ULBP3Q9BZM4 244 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ADGRL4Q9HBW9 690 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 GRHPRQ9UBQ7 328 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 DCTN6O00399 190 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 SCRG1O75711 98 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ACSM3Q53FZ2 586 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ARHGAP11AQ6P4F7 1023 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF671Q8TAW3 534 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 DAZLQ92904 295 aaKnown RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 CHRDQ9H2X0 955 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 B3GAT2Q9NPZ5 323 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 TRAPPC4Q9Y296 219 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 SF3B6Q9Y3B4 125 aaKnown RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 A0A087WUJ7 227 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 PTP4A3O75365 173 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ABCD3P28288 659 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ASAH1Q13510 395 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 PWWP2BQ6NUJ5 590 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 LRRC69Q6ZNQ3 347 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF431Q8TF32 576 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-201ENST00000349062 MED11Q9P086 117 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 WNT16Q9UBV4 365 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 CACNA1GO43497 2377 aa12.66□□□□□ -0.38
TRIM4-201ENST00000349062 LRP4O75096 1905 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 A0A1B0GX78 115 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 NUDT21O43809 227 aaKnown RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 ORC5O43913 435 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 OR6A2O95222 327 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 FBXO45P0C2W1 286 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 EIF1AXP47813 144 aaKnown RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF85Q03923 595 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 HLA-BQ31612 363 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF574Q6ZN55 896 aaPredicted RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 SLC35F2Q8IXU6 374 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 C1orf216Q8TAB5 229 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 DNAJA4Q8WW22 397 aaPredicted RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 METTL21AQ8WXB1 218 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 TAAR8Q969N4 342 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 CNN2Q99439 309 aaKnown RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 DUSP15Q9H1R2 295 aaPredicted RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 MED28Q9H204 178 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 MGAT4AQ9UM21 535 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 H0YIG0 161 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 TSPAN9O75954 239 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 DDAH2O95865 285 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 SNRPBP14678 240 aaKnown RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 ZNF250P15622 560 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 ARSBP15848 533 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 GDPD1Q8N9F7 314 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 TOR1AIP2Q8NFQ8 470 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 OR4M1Q8NGD0 313 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 UPRTQ96BW1 309 aa12.65□□□□□ -0.38
TRIM4-201ENST00000349062 TSPAN10Q9H1Z9 355 aaPredicted RBP12.65□□□□□ -0.38
TRIM4-201ENST00000349062 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
TRIM4-201ENST00000349062 IL1AP01583 271 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 PTGS2P35354 604 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 NUDT1P36639 197 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 PPICP45877 212 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 RPL18Q07020 188 aaKnown RBP12.64□□□□□ -0.39
TRIM4-201ENST00000349062 WBP2NLQ6ICG8 309 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 C19orf48Q6RUI8 117 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 DPY19L4Q7Z388 723 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 NR2C2APQ86WQ0 139 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 SPERTQ8NA61 448 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 LPAR4Q99677 370 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 RALGAPA1Q6GYQ0 2036 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF354AO60765 605 aaPredicted RBP12.64□□□□□ -0.39
TRIM4-201ENST00000349062 MST1P26927 711 aa12.64□□□□□ -0.39
TRIM4-201ENST00000349062 GDI2P50395 445 aaKnown RBP12.64□□□□□ -0.39
TRIM4-201ENST00000349062 LTBQ06643 244 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms