RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 LIN54Q6MZP7 749 aa16.33■□□□□ 0.2
APP-202ENST00000348990 LEG1Q6P5S2 330 aa16.33■□□□□ 0.2
APP-202ENST00000348990 TMEM17Q86X19 198 aa16.33■□□□□ 0.2
APP-202ENST00000348990 SHISA5Q8N114 240 aa16.33■□□□□ 0.2
APP-202ENST00000348990 POMGNT2Q8NAT1 580 aa16.33■□□□□ 0.2
APP-202ENST00000348990 ZPLD1Q8TCW7 415 aa16.33■□□□□ 0.2
APP-202ENST00000348990 LCORQ96JN0 433 aaPredicted RBP16.33■□□□□ 0.2
APP-202ENST00000348990 LMF1Q96S06 567 aa16.33■□□□□ 0.2
APP-202ENST00000348990 TMPRSS13Q9BYE2 586 aa16.33■□□□□ 0.2
APP-202ENST00000348990 PLEKHA1Q9HB21 404 aa16.33■□□□□ 0.2
APP-202ENST00000348990 PRELID3BQ9Y3B1 194 aa16.33■□□□□ 0.2
APP-202ENST00000348990 SNRNP200O75643 2136 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 C1QTNF3-AMACRE9PGA6 284 aa16.32■□□□□ 0.2
APP-202ENST00000348990 SULT1B1O43704 296 aa16.32■□□□□ 0.2
APP-202ENST00000348990 CD3DP04234 171 aa16.32■□□□□ 0.2
APP-202ENST00000348990 CCR4P51679 360 aa16.32■□□□□ 0.2
APP-202ENST00000348990 AKIRIN2Q53H80 203 aa16.32■□□□□ 0.2
APP-202ENST00000348990 ZNF627Q7L945 461 aa16.32■□□□□ 0.2
APP-202ENST00000348990 STK35Q8TDR2 534 aa16.32■□□□□ 0.2
APP-202ENST00000348990 TSEN15Q8WW01 171 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 MKKSQ9NPJ1 570 aaPredicted RBP16.32■□□□□ 0.2
APP-202ENST00000348990 ZNF230Q9UIE0 474 aaPredicted RBP16.32■□□□□ 0.2
APP-202ENST00000348990 NOP16Q9Y3C1 178 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 MDC1Q14676 2089 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 HMSDA8MTL9 139 aa16.32■□□□□ 0.2
APP-202ENST00000348990 CCSO14618 274 aa16.32■□□□□ 0.2
APP-202ENST00000348990 MRPS10P82664 201 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 NAXDQ8IW45 347 aa16.32■□□□□ 0.2
APP-202ENST00000348990 WNT2BQ93097 391 aa16.32■□□□□ 0.2
APP-202ENST00000348990 MIB2Q96AX9 1013 aa16.32■□□□□ 0.2
APP-202ENST00000348990 RXFP3Q9NSD7 469 aa16.32■□□□□ 0.2
APP-202ENST00000348990 KIF26AQ9ULI4 1882 aaPredicted RBP16.32■□□□□ 0.2
APP-202ENST00000348990 DNASE2O00115 360 aaPredicted RBP16.32■□□□□ 0.2
APP-202ENST00000348990 B3GALT2O43825 422 aa16.32■□□□□ 0.2
APP-202ENST00000348990 PTP4A3O75365 173 aa16.32■□□□□ 0.2
APP-202ENST00000348990 THBS1P07996 1170 aa16.32■□□□□ 0.2
APP-202ENST00000348990 CPMP14384 443 aa16.32■□□□□ 0.2
APP-202ENST00000348990 ZNF234Q14588 700 aa16.32■□□□□ 0.2
APP-202ENST00000348990 SEZ6L2Q6UXD5 910 aa16.32■□□□□ 0.2
APP-202ENST00000348990 ZNF227Q86WZ6 799 aa16.32■□□□□ 0.2
APP-202ENST00000348990 EID2Q8N6I1 236 aa16.32■□□□□ 0.2
APP-202ENST00000348990 ZMAT3Q9HA38 289 aaKnown RBP16.32■□□□□ 0.2
APP-202ENST00000348990 ASF1BQ9NVP2 202 aa16.32■□□□□ 0.2
APP-202ENST00000348990 ACTR10Q9NZ32 417 aa16.32■□□□□ 0.2
APP-202ENST00000348990 FLRT3Q9NZU0 649 aa16.32■□□□□ 0.2
APP-202ENST00000348990 C4orf47A7E2U8 309 aa16.31■□□□□ 0.2
APP-202ENST00000348990 UBXN2BQ14CS0 331 aa16.31■□□□□ 0.2
APP-202ENST00000348990 LIPNQ5VXI9 398 aa16.31■□□□□ 0.2
APP-202ENST00000348990 DND1Q8IYX4 353 aaKnown RBP16.31■□□□□ 0.2
APP-202ENST00000348990 OR2L8Q8NGY9 312 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ZNF75AQ96N20 296 aa16.31■□□□□ 0.2
APP-202ENST00000348990 C12orf57Q99622 126 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ADAT1Q9BUB4 502 aaKnown RBP16.31■□□□□ 0.2
APP-202ENST00000348990 HAO2Q9NYQ3 351 aa16.31■□□□□ 0.2
APP-202ENST00000348990 C5orf42Q9H799 3197 aa16.31■□□□□ 0.2
APP-202ENST00000348990 OR6C68A6NDL8 312 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ELOA3DA6NLF2 546 aaPredicted RBP16.31■□□□□ 0.2
APP-202ENST00000348990 M0QYG6 137 aa16.31■□□□□ 0.2
APP-202ENST00000348990 GMFGO60234 142 aa16.31■□□□□ 0.2
APP-202ENST00000348990 NGFRP08138 427 aa16.31■□□□□ 0.2
APP-202ENST00000348990 SPI1P17947 270 aa16.31■□□□□ 0.2
APP-202ENST00000348990 DIO1P49895 249 aa16.31■□□□□ 0.2
APP-202ENST00000348990 DHODHQ02127 395 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ELOA3BQ3SY89 546 aa16.31■□□□□ 0.2
APP-202ENST00000348990 OLFML2AQ68BL7 652 aa16.31■□□□□ 0.2
APP-202ENST00000348990 RAB12Q6IQ22 244 aa16.31■□□□□ 0.2
APP-202ENST00000348990 JAZF1Q86VZ6 243 aa16.31■□□□□ 0.2
APP-202ENST00000348990 SLC35F3Q8IY50 421 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ELOA3Q8NG57 546 aa16.31■□□□□ 0.2
APP-202ENST00000348990 TMEM106AQ96A25 262 aa16.31■□□□□ 0.2
APP-202ENST00000348990 PTDSS2Q9BVG9 487 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ZNF350Q9GZX5 532 aa16.31■□□□□ 0.2
APP-202ENST00000348990 ATG5Q9H1Y0 275 aa16.31■□□□□ 0.2
APP-202ENST00000348990 TRPV4Q9HBA0 871 aa16.31■□□□□ 0.2
APP-202ENST00000348990 PHPT1Q9NRX4 125 aaPredicted RBP16.31■□□□□ 0.2
APP-202ENST00000348990 ZNF275Q9NSD4 429 aaPredicted RBP16.31■□□□□ 0.2
APP-202ENST00000348990 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
APP-202ENST00000348990 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
APP-202ENST00000348990 HIDE1A8MVS5 230 aa16.3■□□□□ 0.2
APP-202ENST00000348990 F5H0A9 414 aaPredicted RBP16.3■□□□□ 0.2
APP-202ENST00000348990 H7C1C5 153 aa16.3■□□□□ 0.2
APP-202ENST00000348990 LCN6P62502 163 aa16.3■□□□□ 0.2
APP-202ENST00000348990 TNFRSF17Q02223 184 aa16.3■□□□□ 0.2
APP-202ENST00000348990 ILF3Q12906 894 aaKnown RBP eCLIP16.3■□□□□ 0.2
APP-202ENST00000348990 ZNF77Q15935 545 aa16.3■□□□□ 0.2
APP-202ENST00000348990 SHEQ5VZ18 495 aa16.3■□□□□ 0.2
APP-202ENST00000348990 SLAIN1Q8ND83 568 aa16.3■□□□□ 0.2
APP-202ENST00000348990 ATOH1Q92858 354 aaPredicted RBP16.3■□□□□ 0.2
APP-202ENST00000348990 POFUT1Q9H488 388 aa16.3■□□□□ 0.2
APP-202ENST00000348990 MED9Q9NWA0 146 aa16.3■□□□□ 0.2
APP-202ENST00000348990 ANKRD10Q9NXR5 420 aa16.3■□□□□ 0.2
APP-202ENST00000348990 DPP7Q9UHL4 492 aa16.3■□□□□ 0.2
APP-202ENST00000348990 MRPS23Q9Y3D9 190 aaKnown RBP16.3■□□□□ 0.2
APP-202ENST00000348990 PLXNA2O75051 1894 aa16.3■□□□□ 0.2
APP-202ENST00000348990 OR14I1A6ND48 311 aa16.3■□□□□ 0.2
APP-202ENST00000348990 GPR31O00270 319 aa16.3■□□□□ 0.2
APP-202ENST00000348990 OR10H2O60403 315 aa16.3■□□□□ 0.2
APP-202ENST00000348990 SNAPC5O75971 98 aa16.3■□□□□ 0.2
APP-202ENST00000348990 ADH1CP00326 375 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms