RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CD79AP11912 226 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 F3P13726 295 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 SLC6A6P31641 620 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 RAB5BP61020 215 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 CXADRP78310 365 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 PDZK1IP1Q13113 114 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 ENPP7Q6UWV6 458 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 DBX2Q6ZNG2 339 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 SLC35F3Q8IY50 421 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 STEAP2Q8NFT2 490 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 ARL11Q969Q4 196 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 DTD2Q96FN9 168 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 CRB3Q9BUF7 120 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 TLNRD1Q9H1K6 362 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 C2orf42Q9NWW7 574 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 LRFN2Q9ULH4 789 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 MED31Q9Y3C7 131 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 WDR45Q9Y484 360 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
LRP8-202ENST00000347547 SCAMP1O15126 338 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 AKR7A3O95154 331 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 AIFM1O95831 613 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 TMIGD3P0DMS9 266 aaPredicted RBP14.33□□□□□ -0.11
LRP8-202ENST00000347547 S100PP25815 95 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 PSMB10P40306 273 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 NPBWR1P48145 328 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 LTBQ06643 244 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 TEAD2Q15562 447 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 AMZ1Q400G9 498 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 ASTLQ6HA08 431 aaPredicted RBP14.33□□□□□ -0.11
LRP8-202ENST00000347547 FAM109BQ6ICB4 259 aaPredicted RBP14.33□□□□□ -0.11
LRP8-202ENST00000347547 C5orf46Q6UWT4 87 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 STOML3Q8TAV4 291 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 ARMC5Q96C12 935 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 CNTNAP3BQ96NU0 1288 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 TCEAL7Q9BRU2 100 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 EGLN1Q9GZT9 426 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 POFUT1Q9H488 388 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 SFXN1Q9H9B4 322 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 ZNF230Q9UIE0 474 aaPredicted RBP14.33□□□□□ -0.11
LRP8-202ENST00000347547 GPR34Q9UPC5 381 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 OR10H1Q9Y4A9 318 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 ATG4BQ9Y4P1 393 aa14.33□□□□□ -0.11
LRP8-202ENST00000347547 TRAV27A0A087WT01 109 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 TBC1D3KA0A087X1G2 549 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 TBC1D3FA6NER0 549 aaPredicted RBP14.33□□□□□ -0.12
LRP8-202ENST00000347547 GGT3PA6NGU5 568 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 C5orf52A6NGY3 159 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 ACTL6AO96019 429 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 GTF2F2P13984 249 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 ADRA2CP18825 462 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 RPS4Y1P22090 263 aaKnown RBP14.33□□□□□ -0.12
LRP8-202ENST00000347547 PNLIPRP2P54317 469 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 CSNK1G2P78368 415 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 SLC7A9P82251 487 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 HABP2Q14520 560 aaPredicted RBP14.33□□□□□ -0.12
LRP8-202ENST00000347547 ZIC1Q15915 447 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 ARHGAP11BQ3KRB8 267 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 TBC1D3GQ6DHY5 549 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 RAB12Q6IQ22 244 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 ANKRD16Q6P6B7 361 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 C11orf96Q7Z7L8 435 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 LRRTM1Q86UE6 522 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 C12orf40Q86WS4 652 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 OR9A2Q8NGT5 310 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 ZNF681Q96N22 645 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 TCF7L1Q9HCS4 588 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 PRDM9Q9NQV7 894 aa14.33□□□□□ -0.12
LRP8-202ENST00000347547 KIAA1549LQ6ZVL6 1849 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 A0A1W2PPV9 198 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 LRRC72A6NJI9 287 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 ZNF806P0C7X5 589 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 HIST1H1TP22492 207 aaPredicted RBP14.32□□□□□ -0.12
LRP8-202ENST00000347547 CFPP27918 469 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 DLSTP36957 453 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 CASRP41180 1078 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 MFSD12Q6NUT3 480 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 CLEC1AQ8NC01 280 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 RNF166Q96A37 237 aaPredicted RBP14.32□□□□□ -0.12
LRP8-202ENST00000347547 DEFB118Q96PH6 123 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 SLC25A21Q9BQT8 299 aaPredicted RBP14.32□□□□□ -0.12
LRP8-202ENST00000347547 MENTQ9BUN1 341 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 VN1R3Q9BXE9 311 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 SLC22A11Q9NSA0 550 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 COMMD9Q9P000 198 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 YBX2Q9Y2T7 364 aaKnown RBP14.32□□□□□ -0.12
LRP8-202ENST00000347547 LTBP2Q14767 1821 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 A0A1W2PS29 197 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 SULT2B1O00204 365 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 ZFPL1O95159 310 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 C8orf89P0DMQ9 161 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 HLA-GP17693 338 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 PSMB5P28074 263 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 NAA10P41227 235 aaPredicted RBP14.32□□□□□ -0.12
LRP8-202ENST00000347547 DIO1P49895 249 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 LIPNQ5VXI9 398 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 TMEM71Q6P5X7 295 aa14.32□□□□□ -0.12
LRP8-202ENST00000347547 SLC16A13Q7RTY0 426 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms