RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 WFDC6Q9BQY6 131 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 TMEM204Q9BSN7 226 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 MYLK2Q9H1R3 596 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 FKRPQ9H9S5 495 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC17A5Q9NRA2 495 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 NDE1Q9NXR1 346 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 ADA2Q9NZK5 511 aa13.87□□□□□ -0.19
TSPAN4-201ENST00000346501 PDZD2O15018 2839 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 M0R1B8 84 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 KPNA4O00629 521 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 CH25HO95992 272 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 IFNW1P05000 195 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 PTNP21246 168 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 LOXP28300 417 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF83P51522 516 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 MNAT1P51948 309 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 GYS2P54840 703 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 MXRA7P84157 204 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 ROR2Q01974 943 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 ADAM5Q6NVV9 412 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 LINC00114Q6XXX2 140 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 PXKQ7Z7A4 578 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 LRRC75A-AS1Q8N1F1 130 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 OR4D11Q8NGI4 311 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 GEMIN6Q8WXD5 167 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 ALKBH3Q96Q83 286 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 AMBRA1Q9C0C7 1298 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 SEC14L4Q9UDX3 406 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 RIMS3Q9UJD0 308 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF229Q9UJW7 825 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 RPS6KA6Q9UK32 745 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 USP22Q9UPT9 525 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 MED31Q9Y3C7 131 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC25A15Q9Y619 301 aa13.86□□□□□ -0.19
TSPAN4-201ENST00000346501 HTR3EA5X5Y0 456 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 PDLIM1O00151 329 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 NME4O00746 187 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 PLPP3O14495 311 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 ABCD4O14678 606 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 RNF13O43567 381 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 ENTPD5O75356 428 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 SERPINI2O75830 405 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 OR1E2P47887 323 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 GSK3BP49841 420 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 NKX6-1P78426 367 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF74Q16587 644 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 IFI44LQ53G44 452 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 ANKRD16Q6P6B7 361 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC22A25Q6T423 547 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 NANOGNBQ7Z5D8 188 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 CYP4Z1Q86W10 505 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 OR6N1Q8NGY5 312 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 TRMT61AQ96FX7 289 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 MOGAT1Q96PD6 335 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 FNDC11Q9BVV2 318 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 B3GAT1Q9P2W7 334 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 TACC2O95359 2948 aa13.85□□□□□ -0.19
TSPAN4-201ENST00000346501 A0A1W2PR80 420 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 DPRXA6NFQ7 191 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 C11orf98E9PRG8 122 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 MS4A18H0YCH9 400 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 SHOX2O60902 331 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 PLAUP00749 431 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 MT-ND1P03886 318 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 TNFRSF1BP20333 461 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 CRYBA2P53672 197 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 RPS4XP62701 263 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 FOXD4Q12950 439 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 PIN1Q13526 163 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 MS4A18Q3C1V0 323 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 ZNF672Q499Z4 452 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 GKAP1Q5VSY0 366 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 RRM2BQ7LG56 351 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 HDDC2Q7Z4H3 204 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 TGIF2LYQ8IUE0 185 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 CCDC36Q8IYA8 594 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 CDK20Q8IZL9 346 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 OR1K1Q8NGR3 316 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 TMEM239Q8WW34 195 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 GTPBP3Q969Y2 492 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 SGTBQ96EQ0 304 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 LRR1Q96L50 414 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 PRRC1Q96M27 445 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 ADAD1Q96M93 576 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 CISD1Q9NZ45 108 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 TAGLN3Q9UI15 199 aa13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 FAM32AQ9Y421 112 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-201ENST00000346501 SLC35F4A4IF30 521 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 LRRN3E7EW58 273 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 BLOC1S5-TXNDC5H3BN57 136 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 RPL36A-HNRNPH2H7BZ11 118 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 TRAF3IP2O43734 574 aaPredicted RBP13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 UPK3AO75631 287 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 ZNF432O94892 652 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 SERPINA1P01009 418 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 IGF2P01344 180 aa13.83□□□□□ -0.2
TSPAN4-201ENST00000346501 CD99P14209 185 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms