RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MR1Q95460 341 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RELTQ969Z4 430 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PELI1Q96FA3 418 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PGLYRP3Q96LB9 341 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NPAS1Q99742 590 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ULBP3Q9BZM4 244 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 OR11A1Q9GZK7 315 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ARRDC1-AS1Q9H2J1 176 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MIXL1Q9H2W2 232 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 CCDC86Q9H6F5 360 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MARCH7Q9H992 704 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SRA1Q9HD15 236 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MED11Q9P086 117 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 V9GYH0 126 aa12.78□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TEX51A0A1B0GUA7 166 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SP9P0CG40 484 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PRKCAP17252 672 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 HTR3AP46098 478 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TMED10P49755 219 aaKnown RBP12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 TRAM1Q15629 374 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 SGCBQ16585 318 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ABHD4Q8TB40 342 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 RNF138Q8WVD3 245 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GHSRQ92847 366 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 KLRF1Q9NZS2 232 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 NCDNQ9UBB6 729 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 ST6GALNAC2Q9UJ37 374 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GNG8Q9UK08 70 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 MOKQ9UQ07 419 aa12.77□□□□□ -0.36
CDK5RAP1-202ENST00000346416 GP1BAP07359 652 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 AHCYP23526 432 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 GRPRP30550 384 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 GBX2P52951 348 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 BTBD16Q32M84 506 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FAM198BQ6UWH4 519 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 LYPD8Q6UX82 237 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 POC5Q8NA72 575 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 STK35Q8TDR2 534 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ST8SIA1Q92185 356 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DEFB126Q9BYW3 111 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 TRAPPC4Q9Y296 219 aa12.77□□□□□ -0.37
CDK5RAP1-202ENST00000346416 LOC102723996A0A087X1L8 192 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ARHGEF9O43307 516 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 KLF7O75840 302 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 UMODP07911 640 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ACP1P24666 158 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CD97P48960 835 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 MTNR1BP49286 362 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SUMO3P55854 103 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SIRPAP78324 504 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF79Q15937 498 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 FAM27D1Q5T7N8 215 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ARSKQ6UWY0 536 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CEACAM19Q7Z692 300 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR10G3Q8NGC4 313 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 INIPQ9NRY2 104 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 WDR70Q9NW82 654 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SLC39A1Q9NY26 324 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 COMMD3Q9UBI1 195 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 VDAC3Q9Y277 283 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PTRH2Q9Y3E5 179 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RALGAPA1Q6GYQ0 2036 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 C9J4A7 227 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OGG1O15527 345 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR2T1O43869 369 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SC5DO75845 299 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 AHSA1O95433 338 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 PLGP00747 810 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RENP00797 406 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SHC1P29353 583 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CCKBRP32239 447 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 HSF2Q03933 536 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 CDK5R1Q15078 307 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SLC6A19Q695T7 634 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 C5orf46Q6UWT4 87 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DBX2Q6ZNG2 339 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 MS4A15Q8N5U1 240 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SLC22A8Q8TCC7 542 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ELP5Q8TE02 316 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 SMIM19Q96E16 107 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 DIRAS2Q96HU8 199 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RASL10BQ96S79 203 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 ATF6BQ99941 703 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 RNF32Q9H0A6 362 aa12.76□□□□□ -0.37
CDK5RAP1-202ENST00000346416 HRH3Q9Y5N1 445 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms