RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SUSD2Q9UGT4 822 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 DIMT1Q9UNQ2 313 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 LAMB2P55268 1798 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 SOWAHBA6NEL2 793 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 PTRH1Q86Y79 214 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 FAM71F1Q96KD3 344 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF728P0DKX0 622 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 COMMD1Q8N668 190 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 OR4C5Q8NGB2 326 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 USP36Q9P275 1121 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 MYLKQ15746 1914 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 GTDC1Q4AE62 458 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 SHEQ5VZ18 495 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 TMEM71Q6P5X7 295 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 PODNL1Q6PEZ8 512 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 LAMP3Q9UQV4 416 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 E5RGE8 158 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 CLDN1O95832 211 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 H2AFB1P0C5Y9 115 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 FKBP2P26885 142 aaKnown RBP18.04■□□□□ 0.48
HDAC4-201ENST00000345617 CHRNEQ04844 493 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 BEX5Q5H9J7 111 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 CYB561A3Q8NBI2 242 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF485Q8NCK3 441 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 SLC6A18Q96N87 628 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 STEAP1BQ6NZ63 245 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 OR1J2Q8NGS2 313 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 OR8U1Q8NH10 309 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 ABHD6Q9BV23 337 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 MMP7P09237 267 aaPredicted RBP18.04■□□□□ 0.48
HDAC4-201ENST00000345617 ENTPD8Q5MY95 495 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 OPN5Q6U736 354 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 RARRES3Q9UL19 164 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 GAB2Q9UQC2 676 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 MEIS3P1A6NDR6 274 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 OR5K3A6NET4 321 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 SDC1P18827 310 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 SIAH3Q8IW03 269 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 ADGRF3Q8IZF5 1079 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 APIPQ96GX9 242 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 ZFYVE21Q9BQ24 234 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 B3GAT1Q9P2W7 334 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 FANCMQ8IYD8 2048 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 DUSP1P28562 367 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 IL2RGP31785 369 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 SLC46A3Q7Z3Q1 461 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 C4orf47A7E2U8 309 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 SYN1P17600 705 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 FRMPD2BQ6IN97 320 aa18.04■□□□□ 0.48
HDAC4-201ENST00000345617 CT45A10P0DMU9 189 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 CCR7P32248 378 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 GABRA2P47869 451 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 NNATQ16517 81 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 FAM69BQ5VUD6 431 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF551Q7Z340 670 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 OR52N1Q8NH53 320 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 SLC7A6Q92536 515 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 A0A1W2PPH5 198 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 TRAF3IP2O43734 574 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 CTXN2P0C2S0 81 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 AHRP35869 848 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 HRASLSQ9HDD0 168 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 ANTXRLA6NF34 631 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 HSPB2A8KAH6 182 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 LILRB3O75022 631 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 HSPB2Q16082 182 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 LY6G5CQ5SRR4 150 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 FAM185AQ8N0U4 392 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 SUMF1Q8NBK3 374 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 DMBX1Q8NFW5 382 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 TSLPQ969D9 159 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 POLEQ07864 2286 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 PSAPL1Q6NUJ1 521 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 CATSPERDQ86XM0 798 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 CPXM2Q8N436 756 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 OR4F15Q8NGB8 312 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 SLC22A12Q96S37 553 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 C11orf54Q9H0W9 315 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 MARCH4Q9P2E8 410 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 SUB1P53999 127 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 SLC35D3Q5M8T2 416 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 OR6K3Q8NGY3 331 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 TGM1P22735 817 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 GPM6BQ13491 265 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 TMEM106AQ96A25 262 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 CCR9P51686 369 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 SIX1Q15475 284 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 VASNQ6EMK4 673 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 METTL27Q8N6F8 245 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 CLRN3Q8NCR9 226 aa18.03■□□□□ 0.48
HDAC4-201ENST00000345617 MYEF2Q9P2K5 600 aaKnown RBP18.03■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF888P0CJ79 500 aaPredicted RBP18.02■□□□□ 0.48
HDAC4-201ENST00000345617 RAC1P63000 192 aa18.02■□□□□ 0.48
HDAC4-201ENST00000345617 MBOAT2Q6ZWT7 520 aa18.02■□□□□ 0.48
HDAC4-201ENST00000345617 DPF1Q92782 380 aa18.02■□□□□ 0.48
HDAC4-201ENST00000345617 UBQLN4Q9NRR5 601 aa18.02■□□□□ 0.48
HDAC4-201ENST00000345617 EIF4EP06730 217 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms