RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 TSPAN10Q9H1Z9 355 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 PPP1R3EQ9H7J1 279 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 ZMAT3Q9HA38 289 aaKnown RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 GLS2Q9UI32 602 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 EXOGQ9Y2C4 368 aaKnown RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SULT1B1O43704 296 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 MAOBP27338 520 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 TAS2R19P59542 299 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 RUNX2Q13950 521 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM151BQ8IW70 566 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 BPIFB2Q8N4F0 458 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 TSSK2Q96PF2 358 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 PCDHB16Q9NRJ7 776 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 KLRF1Q9NZS2 232 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 GPN3Q9UHW5 284 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 TEX13DA0A0J9YY54 714 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM82A0PJX8 343 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 POM121BA6NF01 834 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 HLA-AP01891 365 aaKnown RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 CD14P08571 375 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 PVALBP20472 110 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 IGFBP4P22692 258 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 NR0B1P51843 470 aaKnown RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 CCINQ13939 588 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SLC25A30Q5SVS4 291 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 STEAP2Q8NFT2 490 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 ZBTB8AQ96BR9 441 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 ERVMER34-1Q9H9K5 563 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SDHAF3Q9NRP4 125 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 UBQLN4Q9NRR5 601 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 CDC14CA4D256 554 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF208O43345 1280 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 GLCEO94923 617 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 DIO1P49895 249 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 RAB38P57729 211 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 ST3GAL2Q16842 350 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM184AQ6ZMB5 413 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 THSD4Q6ZMP0 1018 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 UBE3DQ7Z6J8 389 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SYS1Q8N2H4 156 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 PHB2Q99623 299 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SEC16AO15027 2179 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 AIPO00170 330 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 SLC35E2P0CK97 266 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 SPI1P17947 270 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 ITGB8P26012 769 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 DCTDP32321 178 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 RPL35P42766 123 aaKnown RBP14.28□□□□□ -0.12
PTPRU-201ENST00000345512 MC2RQ01718 297 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 USP53Q70EK8 1073 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM234Q8WY98 164 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 ELF4Q99607 663 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-201ENST00000345512 EVA1AQ9H8M9 152 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 SERINC1Q9NRX5 453 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 SIGLEC7Q9Y286 467 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 DSPPQ9NZW4 1301 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 H0Y8X5 98 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 PLPP2O43688 288 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 IFNA21P01568 189 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 WNT1P04628 370 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 PTHLHP12272 177 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 RPS27P42677 84 aaKnown RBP14.28□□□□□ -0.12
PTPRU-201ENST00000345512 IL13RA1P78552 427 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 GPNMBQ14956 572 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 EID2Q8N6I1 236 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 OR51S1Q8NGJ8 323 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM212A6NML5 194 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 SDC3O75056 442 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 GIPP09681 153 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-201ENST00000345512 THEGLP0DJG4 465 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 IFNGR1P15260 489 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 TAS2R20P59543 309 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 NSDHLQ15738 373 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 STEAP1BQ6NZ63 245 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 CCL4L1Q8NHW4 92 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 NEK7Q8TDX7 302 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 FAM3CQ92520 227 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 ZC3HAV1LQ96H79 300 aaKnown RBP14.28□□□□□ -0.12
PTPRU-201ENST00000345512 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-201ENST00000345512 MAN2C1Q9NTJ4 1040 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 SCN10AQ9Y5Y9 1956 aa14.28□□□□□ -0.12
PTPRU-201ENST00000345512 F8W036 122 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 DOK2O60496 412 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 CEACAM5P06731 702 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 GALP22466 123 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 POU3F4P49335 361 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 SEC61A1P61619 476 aaKnown RBP14.27□□□□□ -0.12
PTPRU-201ENST00000345512 BLOC1S1P78537 153 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 SERTAD2Q14140 314 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 NLRC3Q7RTR2 1065 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 OR10K1Q8NGX5 313 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 DAZLQ92904 295 aaKnown RBP14.27□□□□□ -0.12
PTPRU-201ENST00000345512 ASB16Q96NS5 453 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 ACAD8Q9UKU7 415 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 MOKQ9UQ07 419 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 SLC22A7Q9Y694 548 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 LANCL1O43813 399 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 APBB3O95704 486 aa14.27□□□□□ -0.12
PTPRU-201ENST00000345512 CXCL3P19876 107 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms