RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 NSG1A0A0A6YYJ2 146 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 A0A1W2PQL4 384 aaPredicted RBP6.65□□□□□ -1.35
ZNF540-202ENST00000343599 GNGT2O14610 69 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 IFNA10P01566 189 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 IL1RNP18510 177 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 SDHAP31040 664 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 HOXC12P31275 282 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ZFP36L2P47974 494 aaKnown RBP6.65□□□□□ -1.35
ZNF540-202ENST00000343599 CRISP3P54108 245 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 RCAN2Q14206 197 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 PTPRCAPQ14761 206 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ZIC1Q15915 447 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 SSX1Q16384 188 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 TSTQ16762 297 aaKnown RBP6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ATP13A5Q4VNC0 1218 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 CCDC157Q569K6 752 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 SAPCD1Q5SSQ6 148 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 FBXO42Q6P3S6 717 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ENPP6Q6UWR7 440 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ETV3LQ6ZN32 361 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 PDZD9Q8IXQ8 264 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 Q8N402 240 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 POMGNT2Q8NAT1 580 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 OR2T11Q8NH01 316 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 MOSPD2Q8NHP6 518 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 UBTD2Q8WUN7 234 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 GGHQ92820 318 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 FAM173AQ9BQD7 235 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 UTP23Q9BRU9 249 aaKnown RBP6.65□□□□□ -1.35
ZNF540-202ENST00000343599 MRPL37Q9BZE1 423 aaKnown RBP6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ACTR8Q9H981 624 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 NT5MQ9NPB1 228 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 B3GAT2Q9NPZ5 323 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 TREX1Q9NSU2 369 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 ADAM29Q9UKF5 820 aa6.65□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM200CA6NKL6 621 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ACOT7O00154 380 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 CTAG2O75638 210 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 EPPINO95925 133 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 MBP02144 154 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 HCKP08631 526 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ANXA5P08758 320 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF37AP17032 561 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 CEACAM6P40199 344 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 HTR5AP47898 357 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 PIK3CGP48736 1102 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 DAPP51397 102 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 RAB5BP61020 215 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TNFRSF17Q02223 184 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 SCGB2A2Q13296 93 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 GK2Q14410 553 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 PDCD1Q15116 288 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TTLL9Q3SXZ7 439 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM35AQ53FP2 167 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF766Q5HY98 468 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 DDI2Q5TDH0 399 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 NSUN5P2Q63ZY6 315 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 CYB5R2Q6BCY4 276 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 RPL13AP3Q6NVV1 102 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM220Q6QAJ8 160 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM207Q6UWW9 146 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ATP6V1C2Q8NEY4 427 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 POP5Q969H6 163 aaKnown RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 HBEGFQ99075 208 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 GPR22Q99680 433 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 CNPPD1Q9BV87 410 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 OR51J1Q9H342 316 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 RIMS4Q9H426 269 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 AKTIPQ9H8T0 292 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 NTNG1Q9Y2I2 539 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TRBV23OR9-2A0A075B6M9 112 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 A0A1W2PPV9 198 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 OR6C68A6NDL8 312 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 RFPL4AA6NLU0 287 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ANXA2P2A6NMY6 339 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 A8MVJ9 347 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ARHGEF33A8MVX0 844 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 RFPL4AL1F8VTS6 287 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 LRRTM2O43300 516 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 LCMT2O60294 686 aaKnown RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 KDM4BO94953 1096 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 IFNA2P01563 188 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 SLC35E2BP0CK96 405 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 NFKB1P19838 968 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 PAX6P26367 422 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 CCR7P32248 378 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 WNT3AP56704 352 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 PRDX1Q06830 199 aaKnown RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 GANABQ14697 944 aaKnown RBP6.64□□□□□ -1.35
ZNF540-202ENST00000343599 GUSBP1Q15486 140 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 C1orf185Q5T7R7 199 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 FAM111BQ6SJ93 734 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 ANKRD37Q7Z713 158 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 COMTD1Q86VU5 262 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 FTMTQ8N4E7 242 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 OR5L2Q8NGL0 311 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 COQ8AQ8NI60 647 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 SNX33Q8WV41 574 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 OR2A5Q96R48 311 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TBL1YQ9BQ87 522 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms