RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RACK1P63244 317 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 ESPNLQ6ZVH7 1005 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 DNAAF1Q8NEP3 725 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ASB12Q8WXK4 309 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 GPATCH2Q9NW75 528 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 WSB2Q9NYS7 404 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 HS3ST3A1Q9Y663 406 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 PAPLNO95428 1278 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ZFP36L2P47974 494 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 C21orf58P58505 322 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 TAS2R19P59542 299 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 CSNK2A1P68400 391 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 STX12Q86Y82 276 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 CSNK2A3Q8NEV1 391 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 OR5H2Q8NGV7 314 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 WDR76Q9H967 626 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 LIN7BQ9HAP6 207 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ZNF850A8MQ14 1090 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SURF4O15260 269 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 NUPL2O15504 423 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 SCGNO76038 276 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 CRYZL1O95825 349 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 KNG1P01042 644 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SRMP19623 302 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 EVI2BP34910 448 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 DGCR2P98153 550 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 DLX2Q07687 328 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 ALKBH1Q13686 389 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 YIF1BQ5BJH7 314 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 HAGHLQ6PII5 290 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 SLC43A2Q8N370 569 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 FCRL1Q96LA6 429 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 NRTNQ99748 197 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SLC7A11Q9UPY5 501 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 NOX1Q9Y5S8 564 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 DSCR3O14972 297 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 PRKNO60260 465 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 CRTAPO75718 401 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 RAB3AP20336 220 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 GZMMP51124 257 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 DUSP3P51452 185 aaPredicted RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 GPLD1P80108 840 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 PLGLB1Q02325 96 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 BDH1Q02338 343 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 RBMS2Q15434 407 aaKnown RBP6.62□□□□□ -1.35
VCAN-202ENST00000342785 KIAA1958Q8N8K9 716 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 RCBTB1Q8NDN9 531 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 OR5D14Q8NGL3 314 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ZBTB8AQ96BR9 441 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 OR2A14Q96R47 310 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 PHB2Q99623 299 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 PRRT1Q99946 306 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 SLC17A4Q9Y2C5 497 aa6.62□□□□□ -1.35
VCAN-202ENST00000342785 ANKRD61A6NGH8 418 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 C1QBP02746 253 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF806P0C7X5 589 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CD53P19397 219 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CD1CP29017 333 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 HOXC12P31275 282 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 RPS27P42677 84 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 IL13RA1P78552 427 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CYCSP99999 105 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 PLP2Q04941 152 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 OPCMLQ14982 345 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SLC22A6Q4U2R8 563 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 UBE2NLQ5JXB2 153 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 NDUFAF7Q7L592 441 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SYS1Q8N2H4 156 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ACBD4Q8NC06 268 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 OR13C5Q8NGS8 318 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TSSK2Q96PF2 358 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 LRRC37AA6NMS7 1700 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TRAV36DV7A0A075B6V5 113 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 BORCS7-ASMTA0A0B4J1R7 106 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 H7C417 338 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 M0R036 132 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 SPNP16150 400 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SPI1P17947 270 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 FGF9P31371 208 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 CREB3L2Q70SY1 520 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 NUDT22Q9BRQ3 303 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 NAA11Q9BSU3 229 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 ANKRD31Q8N7Z5 1873 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TMED7-TICAM2A0A0A6YYA0 188 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 DNAJB6O75190 326 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 NPR2P20594 1047 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 PCBP4P57723 403 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 SLC35D3Q5M8T2 416 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 KDM8Q8N371 416 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 IL17RCQ8NAC3 791 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TOMM40LQ969M1 308 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZC3H10Q96K80 434 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 MRGPRX1Q96LB2 322 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SEC22CQ9BRL7 303 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 MED18Q9BUE0 208 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF442Q9H7R0 627 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 PLEK2Q9NYT0 353 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms