RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TALDO1P37837 337 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 ADH7P40394 386 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 AQP2P41181 271 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 AGFG1P52594 562 aaKnown RBP13.65□□□□□ -0.22
TPM3-208ENST00000341485 SIRPAP78324 504 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 CBLN3Q6UW01 205 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
TPM3-208ENST00000341485 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 AGBL5Q8NDL9 886 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 OR5H6Q8NGV6 325 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 PHOSPHO1Q8TCT1 267 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 RNF170Q96K19 258 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
TPM3-208ENST00000341485 KLHDC3Q9BQ90 382 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 BEX2Q9BXY8 128 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 APMAPQ9HDC9 416 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 UBQLN4Q9NRR5 601 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 ACOXLQ9NUZ1 547 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 CTSFQ9UBX1 484 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 NPFFR2Q9Y5X5 522 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 IGKV3D-11A0A0A0MRZ8 115 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 TEX13CA0A0J9YWL9 993 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 UTS2O95399 124 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 EDNRAP25101 427 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 PSMB10P40306 273 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 PITPNBP48739 271 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 CCR4P51679 360 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 NUBP1P53384 320 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 PRPS1P60891 318 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 DCDP81605 110 aaKnown RBP13.65□□□□□ -0.22
TPM3-208ENST00000341485 GPR176Q14439 515 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 NSDHLQ15738 373 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 ZNF74Q16587 644 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 CEP78Q5JTW2 689 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 COX15Q7KZN9 410 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 SYT9Q86SS6 491 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 SLC7A5P1Q8MH63 180 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 LRRC75AQ8NAA5 344 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 OR6K6Q8NGW6 343 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 RFT1Q96AA3 541 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 Q96M85 177 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 MOGAT1Q96PD6 335 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 CCNL2Q96S94 520 aaPredicted RBP13.65□□□□□ -0.22
TPM3-208ENST00000341485 MARVELD1Q9BSK0 173 aa13.65□□□□□ -0.22
TPM3-208ENST00000341485 THAP7Q9BT49 309 aaPredicted RBP13.65□□□□□ -0.22
TPM3-208ENST00000341485 RALGAPA1Q6GYQ0 2036 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 A0A0B4J203 849 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 FZD7O75084 574 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 SERPINI2O75830 405 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 UCHL1P09936 223 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 ZNF806P0C7X5 589 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 PNMTP11086 282 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 ATF1P18846 271 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 MST1P26927 711 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 CDKN2AP42771 156 aaKnown RBP13.64□□□□□ -0.23
TPM3-208ENST00000341485 PPICP45877 212 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 CD83Q01151 205 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
TPM3-208ENST00000341485 IL11RAQ14626 422 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 LINC01590Q5TEZ4 76 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 RPL22L1Q6P5R6 122 aaKnown RBP13.64□□□□□ -0.23
TPM3-208ENST00000341485 LEG1Q6P5S2 330 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 SLC38A9Q8NBW4 561 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 ABHD1Q96SE0 405 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 VN1R1Q9GZP7 353 aa13.64□□□□□ -0.23
TPM3-208ENST00000341485 TRBV2A0A0J9YWF9 115 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 TCRBV16S1A1N1A0A5B0 115 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 NOTOA8MTQ0 251 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 FAM171A2A8MVW0 826 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 PRR32B1ATL7 298 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 BLOC1S5-TXNDC5H3BN57 136 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 SCDO00767 359 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 SLC43A1O75387 559 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 GLCEO94923 617 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 IGF2P01344 180 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 CD1AP06126 327 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 FGF5P12034 268 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 SNRPBP14678 240 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 HPGDP15428 266 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 MRPS15P82914 257 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 IL10RAQ13651 578 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 ELAVL1Q15717 326 aaKnown RBP13.63□□□□□ -0.23
TPM3-208ENST00000341485 SHISA6Q6ZSJ9 500 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 ASB18Q6ZVZ8 466 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 FAM122BQ7Z309 247 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 C10orf53Q8N6V4 93 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 STT3BQ8TCJ2 826 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 LIPHQ8WWY8 451 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 SLC46A1Q96NT5 459 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 OR14A2Q96R54 314 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 PDCD1LG2Q9BQ51 273 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 OR8D2Q9GZM6 311 aa13.63□□□□□ -0.23
TPM3-208ENST00000341485 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms