RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 C10orf82Q8WW14 230 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 SLC41A3Q96GZ6 507 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 MPP4Q96JB8 637 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 ZNF587Q96SQ5 575 aaPredicted RBP11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 ASPNQ9BXN1 380 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 SLC19A3Q9BZV2 496 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 POLR2J2Q9GZM3 115 aaKnown RBP11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 POLR2J3Q9H1A7 115 aaKnown RBP11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 SLC17A5Q9NRA2 495 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 NPAP1Q9NZP6 1156 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 BAG5Q9UL15 447 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 ARL2BPQ9Y2Y0 163 aa11.71□□□□□ -0.53
SIRPB3P-201ENST00000340424 ROS1P08922 2347 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 FAM171A2A8MVW0 826 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 M0R3H8 397 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 ABCD4O14678 606 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 SLC43A1O75387 559 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF432O94892 652 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 OPN1SWP03999 348 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 CD247P20963 164 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 GRPRP30550 384 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 PTH2RP49190 550 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 SELENOPP49908 381 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 CDH11P55287 796 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 ETFDHQ16134 617 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 RABL3Q5HYI8 236 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 ENTPD8Q5MY95 495 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 NIPAL3Q6P499 406 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 LINC00114Q6XXX2 140 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 KBTBD8Q8NFY9 601 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 GPR32P1Q8NGA4 272 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR6T1Q8NGN1 323 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 LILRB1Q8NHL6 650 aaPredicted RBP11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 RP9Q8TA86 221 aaKnown RBP11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 MAGEE2Q8TD90 523 aaPredicted RBP11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 PROX1Q92786 737 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 GTPBP3Q969Y2 492 aaKnown RBP11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 TAMM41Q96BW9 452 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 PERPQ96FX8 193 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 MRPL39Q9NYK5 338 aaKnown RBP11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 B3GAT1Q9P2W7 334 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 LAMP3Q9UQV4 416 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 MTORP42345 2549 aa11.7□□□□□ -0.54
SIRPB3P-201ENST00000340424 LOC100653049A0A140TA62 436 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 TRAPPC13A5PLN9 417 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 FAM220BPB1ANY3 271 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 SHISA9B4DS77 424 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 RPL36A-HNRNPH2H7BZ11 118 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 KRT34O76011 436 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 DANCRP0C864 163 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 CD40P25942 277 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZNF83P51522 516 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 CLDN17P56750 224 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 PUDPQ08623 228 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 BNIP1Q12981 228 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 HMBOX1Q6NT76 420 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 SPATA21Q7Z572 469 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 BIVMQ86UB2 503 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 UEVLDQ8IX04 471 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 WDR31Q8NA23 367 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 PIK3C3Q8NEB9 887 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR1K1Q8NGR3 316 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ADAMTS16Q8TE57 1224 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 C18orf12Q96KH6 178 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ELAC2Q9BQ52 826 aaKnown RBP11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 BDH2Q9BUT1 245 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ALG2Q9H553 416 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 FKRPQ9H9S5 495 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 CISD1Q9NZ45 108 aaKnown RBP11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 NOX1Q9Y5S8 564 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 PRR14LQ5THK1 2151 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ZFHX3Q15911 3703 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 ARID1AO14497 2285 aa11.69□□□□□ -0.54
SIRPB3P-201ENST00000340424 CPSF4LA6NMK7 179 aaKnown RBP11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 OVOL3O00110 214 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 BGLAPP02818 100 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 MNAT1P51948 309 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 FOXG1P55316 489 aaPredicted RBP11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 IL1RL1Q01638 556 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 PMS2P3Q13401 168 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 NPTX1Q15818 432 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 C3orf36Q3SXR2 165 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 C9orf135Q5VTT2 229 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 AGAP6Q5VW22 663 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 ANKRD16Q6P6B7 361 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 TTC33Q6PID6 262 aaPredicted RBP11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 SLC22A25Q6T423 547 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 DTX2Q86UW9 622 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 CCDC36Q8IYA8 594 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 GPR137CQ8N3F9 429 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 OR2T12Q8NG77 320 aa11.68□□□□□ -0.54
SIRPB3P-201ENST00000340424 LRR1Q96L50 414 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms