RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NMNAT1Q9HAN9 279 aaPredicted RBP13.46□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF229Q9UJW7 825 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 FAM32AQ9Y421 112 aaKnown RBP13.46□□□□□ -0.26
UBE3B-201ENST00000340074 TRAF3IP2O43734 574 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-201ENST00000340074 CTAG2O75638 210 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 OR6A2O95222 327 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 IGF2P01344 180 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 HIST1H2ABP04908 130 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 THBDP07204 575 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 PPP3CBP16298 524 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 RHCEP18577 417 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 FUT1P19526 365 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 DNAJA1P31689 397 aaKnown RBP13.45□□□□□ -0.26
UBE3B-201ENST00000340074 FOXG1P55316 489 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-201ENST00000340074 KRTAP10-9P60411 292 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 POU3F1Q03052 451 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-201ENST00000340074 BNIP1Q12981 228 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 IQCCQ4KMZ1 466 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 DNAL1Q4LDG9 190 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 HIST3H2AQ7L7L0 130 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF433Q8N7K0 673 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-201ENST00000340074 PIK3C3Q8NEB9 887 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 HIST1H2ACQ93077 130 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 CCDC124Q96CT7 223 aaKnown RBP13.45□□□□□ -0.26
UBE3B-201ENST00000340074 SGTBQ96EQ0 304 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 OR10A4Q9H209 315 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 MUC13Q9H3R2 512 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF226Q9NYT6 803 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 TAS2R5Q9NYW4 299 aa13.45□□□□□ -0.26
UBE3B-201ENST00000340074 PDZD2O15018 2839 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 FAM221AA4D161 298 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 BLOC1S5-TXNDC5H3BN57 136 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 PDLIM1O00151 329 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 SERPINI2O75830 405 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 OR7A10O76100 309 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF432O94892 652 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
UBE3B-201ENST00000340074 ITGA5P08648 1049 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 ITGA2P17301 1181 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 LGALS3BPQ08380 585 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 C9orf135Q5VTT2 229 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 LCN8Q6JVE9 175 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 TBPL2Q6SJ96 375 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 NHLRC1Q6VVB1 395 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 NANOGNBQ7Z5D8 188 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 PXKQ7Z7A4 578 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 MEX3DQ86XN8 651 aaKnown RBP13.44□□□□□ -0.26
UBE3B-201ENST00000340074 NRMQ8IXM6 262 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 POMGNT2Q8NAT1 580 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-201ENST00000340074 MCUR1Q96AQ8 359 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 BPIFA2Q96DR5 249 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 BTBD10Q9BSF8 475 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 RASSF1Q9NS23 344 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 TAS2R16Q9NYV7 291 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 RCE1Q9Y256 329 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 NOX1Q9Y5S8 564 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
UBE3B-201ENST00000340074 HEATR1Q9H583 2144 aaKnown RBP13.43□□□□□ -0.26
UBE3B-201ENST00000340074 A0A087WUU8 490 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 TCRBV5S2A0A599 114 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 SIAH2O43255 324 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 RNF13O43567 381 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 UPK3AO75631 287 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 RAD51DO75771 328 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 KRT33AO76009 404 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 IFI30P13284 250 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 CRYGSP22914 178 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 PRKCDQ05655 676 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ZP4Q12836 540 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 FBXW10Q5XX13 1052 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ALKBH2Q6NS38 261 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF730Q6ZMV8 503 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 WFDC8Q8IUA0 241 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 WDFY1Q8IWB7 410 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 SLC7A13Q8TCU3 470 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ASB9Q96DX5 294 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 TXNDC15Q96J42 360 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ALKBH3Q96Q83 286 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-201ENST00000340074 OR2M2Q96R28 347 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 SEPHS2Q99611 448 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 PIP5K1AQ99755 562 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 EMC6Q9BV81 110 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 CLEC4MQ9H2X3 399 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ANKRD19PQ9H560 264 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 IL1RAPQ9NPH3 570 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 MED29Q9NX70 200 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 CSMD1Q96PZ7 3565 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 TEX15Q9BXT5 2789 aa13.43□□□□□ -0.26
UBE3B-201ENST00000340074 ANKRD17O75179 2603 aaKnown RBP13.42□□□□□ -0.26
UBE3B-201ENST00000340074 A0A1W2PRQ8 180 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 CIB4A0PJX0 185 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 SLC35F4A4IF30 521 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 AKAP8O43823 692 aaKnown RBP13.42□□□□□ -0.26
UBE3B-201ENST00000340074 FABP3P05413 133 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 IFNGR1P15260 489 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 MAKP20794 623 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms