RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 BAXQ07812 192 aa12.16□□□□□ -0.46
HLCS-201ENST00000336648 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
HLCS-201ENST00000336648 OGFOD3Q6PK18 319 aa12.16□□□□□ -0.46
HLCS-201ENST00000336648 VRK2Q86Y07 508 aa12.16□□□□□ -0.46
HLCS-201ENST00000336648 LIPCP11150 499 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 NME2P22392 152 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 FKBP2P26885 142 aaKnown RBP12.15□□□□□ -0.46
HLCS-201ENST00000336648 RRADP55042 308 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 ADIRFQ15847 76 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 ISYNA1Q9NPH2 558 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 NOX4Q9NPH5 578 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 OLAHQ9NV23 265 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 CAMK2AQ9UQM7 478 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 LDB3O75112 727 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 PTBP3O95758 552 aaKnown RBP12.15□□□□□ -0.46
HLCS-201ENST00000336648 MT-ND4LP03901 98 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 NAGAP17050 411 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 ELK1P19419 428 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 HTR5AP47898 357 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 HNF4GQ14541 408 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 STK11Q15831 433 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 BCL7AQ4VC05 210 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 FAM57BQ71RH2 274 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 A0A1W2PPH5 198 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 CIDEAO60543 219 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 ZNF133P52736 654 aaPredicted RBP12.15□□□□□ -0.46
HLCS-201ENST00000336648 PTTG1IPP53801 180 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 BIDP55957 195 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 MEP1BQ16820 701 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 LSMEM2Q8N112 164 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 EMC7Q9NPA0 242 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 SLC2A8Q9NY64 477 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 EMCNQ9ULC0 261 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 C4orf47A7E2U8 309 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 GABARAPH6UMI1 98 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 DVL1O14640 695 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 GABARAPO95166 117 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 PDGFAP04085 211 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 FABP1P07148 127 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 DVL1P1P54792 670 aaPredicted RBP12.15□□□□□ -0.46
HLCS-201ENST00000336648 MRPL2Q5T653 305 aaKnown RBP12.15□□□□□ -0.46
HLCS-201ENST00000336648 DPY19L2P2Q6ZN68 376 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 YIPF5Q969M3 257 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 METTL17Q9H7H0 456 aaPredicted RBP12.15□□□□□ -0.46
HLCS-201ENST00000336648 A4GALTQ9NPC4 353 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 PSORS1C1Q9UIG5 152 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 EMC9Q9Y3B6 208 aa12.15□□□□□ -0.46
HLCS-201ENST00000336648 MON2Q7Z3U7 1717 aa12.15□□□□□ -0.47
HLCS-201ENST00000336648 DPP4P27487 766 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 CD38P28907 300 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SLC1A3P43003 542 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 PSMB3P49720 205 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 RPE65Q16518 533 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 DEFB133Q30KQ1 61 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 LDLRAD1Q5T700 205 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SLC24A4Q8NFF2 622 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 FAM173AQ9BQD7 235 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 EPHX3Q9H6B9 360 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 NPIPA5A0A0B4J1W7 369 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SERINC4A6NH21 518 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 CHEK1O14757 476 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SUSD5O60279 629 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 CXCL12P48061 93 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 NOVP48745 357 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 MTCP1P56278 107 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 RANP62826 216 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 EXOSC7Q15024 291 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 EBPQ15125 230 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 ZNF761Q86XN6 746 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 RBMXL3Q8N7X1 1067 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 NRG4Q8WWG1 115 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 SLC25A21Q9BQT8 299 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 WDR83Q9BRX9 315 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 FBXL4Q9UKA2 621 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 TRAPPC2LQ9UL33 140 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 YTHDF2Q9Y5A9 579 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 NUDT19A8MXV4 375 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 AIFM1O95831 613 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 CTRB1P17538 263 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 HSF5Q4G112 596 aaPredicted RBP12.14□□□□□ -0.47
HLCS-201ENST00000336648 CTSL3PQ5NE16 218 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 MORN1Q5T089 497 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
HLCS-201ENST00000336648 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms