RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TMPRSS9Q7Z410 1059 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 UNC93AQ86WB7 457 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 NAXDQ8IW45 347 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPR151Q8TDV0 419 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 LACRTQ9GZZ8 138 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 NFS1Q9Y697 457 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CEMIPQ8WUJ3 1361 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 TRAV36DV7A0A075B6V5 113 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 FABP7O15540 132 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF780AO75290 641 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 IGHDP01880 384 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADH4P08319 380 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CD37P11049 281 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDR4P57081 412 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 PMS2P11Q13670 270 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SHEQ5VZ18 495 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 REP15Q6BDI9 236 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 FSTL4Q6MZW2 842 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 Q7L0L9 218 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 RNF180Q86T96 592 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 EBF4Q9BQW3 602 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SH2D3AQ9BRG2 576 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDCPQ9H6R7 721 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 PIPOXQ9P0Z9 390 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 RABAC1Q9UI14 185 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 FZD10Q9ULW2 581 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC45A1Q9Y2W3 748 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 UBR1Q8IWV7 1749 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR52A4PA6NMU1 304 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 IQCF5A8MTL0 148 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF878C9JN71 531 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CNMDO75829 334 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 HOXC13P31276 330 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 MEOX1P50221 254 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 MTMR14Q8NCE2 650 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR6C1Q96RD1 312 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CGRRF1Q99675 332 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SNRNP25Q9BV90 132 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPR87Q9BY21 358 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALDOBP05062 364 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 GAAP10253 952 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF26P17031 533 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPS26P62854 115 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 DCDP81605 110 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ITPRIPL2Q3MIP1 535 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CTXN3Q4LDR2 81 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM136Q6ZRR5 245 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR5D16Q8NGK9 328 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 STAG3L4Q8TBR4 150 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 AGPAT1Q99943 283 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 KLRF1Q9NZS2 232 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 HSPB7Q9UBY9 170 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 EMC9Q9Y3B6 208 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 TRBV23-1A0A0A0MS06 115 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 MZT1Q08AG7 82 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 NRMQ8IXM6 262 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 LINC00518Q8N0U6 118 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 IPMKQ8NFU5 416 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 GEMIN6Q8WXD5 167 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 LRTOMTQ8WZ04 291 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 RBP7Q96R05 134 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACER3Q9NUN7 267 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 DNPEPQ9ULA0 475 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 VWA7Q9Y334 891 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A1W2PRD5 423 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 URADA6NGE7 173 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM88BA6NKF7 163 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 PBX2P40425 430 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SHC2P98077 582 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC27A4Q6P1M0 643 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CLEC2AQ6UVW9 174 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 C11orf42Q8N5U0 333 aa5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 NAA11Q9BSU3 229 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 KIAA1522Q9P206 1035 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-201ENST00000334218 CSNK1G2P78368 415 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPS26P11Q5JNZ5 115 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 NBPF12Q5TAG4 269 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 KIAA1211LQ6NV74 962 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MYPOPQ86VE0 399 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 NR2C2APQ86WQ0 139 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TNS4Q8IZW8 715 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 BEND2Q8NDZ0 799 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SOCS4Q8WXH5 440 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 EAF2Q96CJ1 260 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 HHIPQ96QV1 700 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TAAR9Q96RI9 348 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC38A7Q9NVC3 462 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CPNE7Q9UBL6 633 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 DPP7Q9UHL4 492 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALOX12BO75342 701 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CLEC3AO75596 197 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACAA1P09110 424 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 TM4SF1P30408 202 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 CSN1S1P47710 185 aa5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 MFGE8Q08431 387 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-201ENST00000334218 AANATQ16613 207 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms