RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DMWDQ09019 674 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ESPNLQ6ZVH7 1005 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 EXD3Q8N9H8 876 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 OIT3Q8WWZ8 545 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 TRIM63Q969Q1 353 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 RFT1Q96AA3 541 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 OMA1Q96E52 524 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 MESP1Q9BRJ9 268 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 MOV10Q9HCE1 1003 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 NOX4Q9NPH5 578 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 COPS7AQ9UBW8 275 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 NUP210LQ5VU65 1888 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 IGHV3-20A0A0C4DH32 117 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 HTR3EA5X5Y0 456 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 SCO2O43819 266 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 TSPAN2O60636 221 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ARL6IP5O75915 188 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 OR8G3PP0DMU2 310 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 RPS27P42677 84 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 AGFG1P52594 562 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 CCDC58Q4VC31 144 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 PTCRAQ6ISU1 281 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 CEP76Q8TAP6 659 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 DNASE2BQ8WZ79 361 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 RNF166Q96A37 237 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF501Q96CX3 271 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 TBL1XR1Q9BZK7 514 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC25A18Q9H1K4 315 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 BRD7Q9NPI1 651 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ALG5Q9Y673 324 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ZFPL1O95159 310 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 GPANK1O95872 356 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 APEHP13798 732 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 CXCR1P25024 350 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC25A1P53007 311 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 RAB25P57735 213 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 DCAF7P61962 342 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 CD83Q01151 205 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 GPR176Q14439 515 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 HSD17B12Q53GQ0 312 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 RNASE12Q5GAN4 147 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 OR6V1Q8N148 313 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 OR1N1Q8NGS0 311 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SYNDIG1Q9H7V2 258 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 WDFY3Q8IZQ1 3526 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 DMDP11532 3685 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 C11orf98E9PRG8 122 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 PIN1P1O15428 100 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 GATBO75879 557 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 HIST1H2ABP04908 130 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 DCNP07585 359 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC6A8P48029 635 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SRP9P49458 86 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 GPLD1P80108 840 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 C16orf47Q6ZP98 133 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 HIST3H2AQ7L7L0 130 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC29A4Q7RTT9 530 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC16A9Q7RTY1 509 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 CARFQ8N187 725 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 RGP1Q92546 391 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 HIST1H2ACQ93077 130 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 MRPL48Q96GC5 212 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 DERL3Q96Q80 235 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 TSPAN10Q9H1Z9 355 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SYT4Q9H2B2 425 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 ATXN7L1Q9ULK2 861 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 MRPS7Q9Y2R9 242 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC6A5Q9Y345 797 aa13.49□□□□□ -0.25
CLCNKA-201ENST00000331433 ALG1L2C9J202 215 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 TXNDC12O95881 172 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 GSTT2P0CG29 244 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 GSTT2BP0CG30 244 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 CLDN20P56880 219 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 HSF2Q03933 536 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 TIGD4Q8IY51 512 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC25A36Q96CQ1 311 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 SHDQ96IW2 340 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 SEMA5BQ9P283 1151 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 FRYLO94915 3013 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 TO15178 435 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 PLGP00747 810 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 SRMP19623 302 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 KRT74Q7RTS7 529 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 PRSS42Q7Z5A4 293 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 CCDC74AQ96AQ1 378 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 ADAD1Q96M93 576 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 GFM1Q96RP9 751 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 WDR76Q9H967 626 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC22A11Q9NSA0 550 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms