RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TRAV18A0A075B6X5 111 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 J3QRE1 110 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SCDO00767 359 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 PTP4A3O75365 173 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC35E2P0CK97 266 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 TMIGD3P0DMS9 266 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 LIPCP11150 499 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 GTF2F2P13984 249 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 ARL4DP49703 201 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 DIO1P49895 249 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 NANOS3P60323 173 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 LGALSLQ3ZCW2 172 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 TMEM255AQ5JRV8 349 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF627Q7L945 461 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 MCATQ8IVS2 390 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 C16orf52Q8NHV5 167 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 MRGPRX1Q96LB2 322 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 DLL4Q9NR61 685 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SERINC4A6NH21 518 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC25A12O75746 678 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SPARCP09486 303 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 GALP22466 123 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 MNDAP41218 407 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 ACAA2P42765 397 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 RAB38P57729 211 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 RIN1Q13671 783 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 LINC00303Q3SY05 128 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 LRRC37A5PQ49AS3 106 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 NLRC3Q7RTR2 1065 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 OR51D1Q8NGF3 324 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 ACTR6Q9GZN1 396 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 ARL6Q9H0F7 186 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 DIABLOQ9NR28 239 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 KLF15Q9UIH9 416 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC6A5Q9Y345 797 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 ENTPD2Q9Y5L3 495 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 RP1P56715 2156 aa11.79□□□□□ -0.52
HMGCS1-201ENST00000325110 A0A087WV62 115 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 RBBP9O75884 186 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 CFDP00746 253 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 PTH2RP49190 550 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 TPMTP51580 245 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 ATXN7L3Q14CW9 347 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 CLPPQ16740 277 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 HLA-DQA1Q5Y7H0 255 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 SIGIRRQ6IA17 410 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 CBLN3Q6UW01 205 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 OR10AC1Q8NH08 325 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 ANKRD9Q96BM1 317 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 MOGAT1Q96PD6 335 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 TGM7Q96PF1 710 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 G6PC3Q9BUM1 346 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF337Q9Y3M9 751 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 PIAS3Q9Y6X2 628 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 HEATR5AQ86XA9 2040 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 PPM1BO75688 479 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 OR7A10O76100 309 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 NKX2-2O95096 273 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 CDKN2AP42771 156 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 OR5M10Q6IEU7 315 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 LRRN1Q6UXK5 716 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 MED25Q71SY5 747 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 MED30Q96HR3 178 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 MAP3K3Q99759 626 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 SARGQ9BW04 601 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 SLCO1C1Q9NYB5 712 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 C7orf66A4D0T2 115 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 H0YC42 278 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 THEGLP0DJG4 465 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 HTR4Q13639 388 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 FHL5Q5TD97 284 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 PXDC1Q5TGL8 231 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 NHLRC1Q6VVB1 395 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 OR10A5Q9H207 317 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 CHRNA9Q9UGM1 479 aa11.78□□□□□ -0.52
HMGCS1-201ENST00000325110 MED12Q93074 2177 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 FAM25EA8MYX2 175 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 PIN1P1O15428 100 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 SEMA4FO95754 770 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 CTHP32929 405 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 KIAA1024LP59773 190 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 SKP1P63208 163 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 GUCA2AQ02747 115 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 PLAURQ03405 335 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 LTBQ06643 244 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 OPCMLQ14982 345 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 PXKQ7Z7A4 578 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 FAM174AQ8TBP5 190 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 METTL21AQ8WXB1 218 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC38A3Q99624 504 aa11.77□□□□□ -0.52
HMGCS1-201ENST00000325110 EXO5Q9H790 373 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms