RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 IMPA1P29218 277 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 OR1D4P47884 311 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 Q6ZTK2 550 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 LSMEM2Q8N112 164 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 ELAVL4P26378 380 aaKnown RBP19.5■□□□□ 0.71
RNF40-201ENST00000324685 RAB11AP62491 216 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 PKDCCQ504Y2 493 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 WDR88Q6ZMY6 472 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 KLHDC8BQ8IXV7 354 aa19.5■□□□□ 0.71
RNF40-201ENST00000324685 LRP6O75581 1613 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 PAPLNO95428 1278 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 HLA-DOBP13765 273 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 ALKBH1Q13686 389 aaKnown RBP19.49■□□□□ 0.71
RNF40-201ENST00000324685 TAS1R1Q7RTX1 841 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 NKAIN3Q8N8D7 197 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 PXT1Q8NFP0 134 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.49■□□□□ 0.71
RNF40-201ENST00000324685 TMEM184BQ9Y519 407 aaPredicted RBP19.49■□□□□ 0.71
RNF40-201ENST00000324685 DPP4P27487 766 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SHC1P29353 583 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SNCAP37840 140 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 CXCL12P48061 93 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 FOXK2Q01167 660 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 AKR1C1Q04828 323 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SLC10A1Q14973 349 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SLC35D3Q5M8T2 416 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SHEQ5VZ18 495 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 FBXO46Q6PJ61 603 aaPredicted RBP19.49■□□□□ 0.71
RNF40-201ENST00000324685 PHOSPHO2Q8TCD6 241 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 MITD1Q8WV92 249 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 FGF13Q92913 245 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 KCNIP2Q9NS61 270 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 RNF4P78317 190 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 MFAP5Q13361 173 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 ESCO2Q56NI9 601 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SLC35D2Q76EJ3 337 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 TMEM174Q8WUU8 243 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 ZNF845Q96IR2 970 aaPredicted RBP19.49■□□□□ 0.71
RNF40-201ENST00000324685 SELENOIQ9C0D9 397 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 LRP5LA4QPB2 252 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 FPR3P25089 353 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 BLVRBP30043 206 aaPredicted RBP19.49■□□□□ 0.71
RNF40-201ENST00000324685 SERPINF1P36955 418 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SSR4P51571 173 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SLC39A13Q96H72 371 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 PBX4Q9BYU1 374 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 SLC39A9Q9NUM3 307 aa19.49■□□□□ 0.71
RNF40-201ENST00000324685 TMED7-TICAM2A0A0A6YYA0 188 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TMEM221A6NGB7 291 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 GJB3O75712 270 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TCRBP04435 133 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 CLDN12P56749 244 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 HABP2Q14520 560 aaPredicted RBP19.48■□□□□ 0.71
RNF40-201ENST00000324685 ZNF266Q14584 549 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 STEAP1BQ6NZ63 245 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TBPL2Q6SJ96 375 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 SLCO4C1Q6ZQN7 724 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 RETREG3Q86VR2 466 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 GRAMD2AQ8IUY3 354 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 LINC01599Q8WXQ3 324 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TMEM106AQ96A25 262 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 NEURL3Q96EH8 262 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 QPCTLQ9NXS2 382 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 NOSIPQ9Y314 301 aaKnown RBP19.48■□□□□ 0.71
RNF40-201ENST00000324685 TMED7Q9Y3B3 224 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 H7C1C5 153 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 SULT1B1O43704 296 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TIMM8AO60220 97 aaPredicted RBP19.48■□□□□ 0.71
RNF40-201ENST00000324685 SCRG1O75711 98 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TUSC2O75896 110 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 ITGB8P26012 769 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 LCN6P62502 163 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 SMAD2Q15796 467 aaKnown RBP19.48■□□□□ 0.71
RNF40-201ENST00000324685 STEAP3Q658P3 488 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 KCTD11Q693B1 232 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 OR52I1Q8NGK6 324 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 HRASLSQ9HDD0 168 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 H7C1Q1 480 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 FABP7O15540 132 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 UTS2O95399 124 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 PTBP1P26599 531 aaKnown RBP eCLIP19.48■□□□□ 0.71
RNF40-201ENST00000324685 HLA-FP30511 346 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 DEFA6Q01524 100 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 HNF4GQ14541 408 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 MDGA2Q7Z553 956 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 CHTF18Q8WVB6 975 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 ZBED3Q96IU2 234 aaPredicted RBP19.48■□□□□ 0.71
RNF40-201ENST00000324685 ZNF75AQ96N20 296 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 MS4A8Q9BY19 250 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 WASH6PQ9NQA3 447 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 RBMXL3Q8N7X1 1067 aaKnown RBP19.48■□□□□ 0.71
RNF40-201ENST00000324685 OR52N1Q8NH53 320 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 RPH3ALQ9UNE2 315 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 PMS2P2O95744 297 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 SECTM1Q8WVN6 248 aa19.48■□□□□ 0.71
RNF40-201ENST00000324685 TRDV1A0A1B0GX56 115 aa19.47■□□□□ 0.71
RNF40-201ENST00000324685 MAT1AQ00266 395 aaKnown RBP19.47■□□□□ 0.71
RNF40-201ENST00000324685 TAZQ16635 292 aa19.47■□□□□ 0.71
RNF40-201ENST00000324685 ADGRE4PQ86SQ3 457 aa19.47■□□□□ 0.71
RNF40-201ENST00000324685 SLC51BQ86UW2 128 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms