RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ZNF566Q969W8 418 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SLC9B1P1A6NJY1 282 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 YY2O15391 372 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 GASTP01350 101 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SLC1A3P43003 542 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SLC22A24Q8N4F4 322 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 FOXJ1Q92949 421 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 C1orf198Q9H425 327 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 CPMP14384 443 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 CR2P20023 1033 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 RBPJLQ9UBG7 517 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 IVDP26440 423 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 RANP62826 216 aaKnown RBP15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 POU3F1Q03052 451 aaPredicted RBP15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 IKZF1Q13422 519 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 MRPL2Q5T653 305 aaKnown RBP15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 APCDD1Q8J025 514 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 CBARPQ8N350 705 aaPredicted RBP15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 KPTNQ9Y664 436 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 CHD5Q8TDI0 1954 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 SNRPBP14678 240 aaKnown RBP15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 ITGB7P26010 798 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 STEAP1BQ6NZ63 245 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 C5orf46Q6UWT4 87 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 ZNF251Q9BRH9 671 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 TAF1P21675 1872 aa15.7■□□□□ 0.1
SMCHD1-201ENST00000320876 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 GSK3AP49840 483 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 H3F3AP84243 136 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 HYAL4Q2M3T9 481 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 FRMPD2BQ6IN97 320 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 FAM185AQ8N0U4 392 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 C11orf54Q9H0W9 315 aaPredicted RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 PSORS1C1Q9UIG5 152 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 PCDHB10Q9UN67 800 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 DTYMKP23919 212 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 HTR1FP30939 366 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 RANBP10Q6VN20 620 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 TMEM106AQ96A25 262 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 ABHD6Q9BV23 337 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 TRAPPC2LQ9UL33 140 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 FAM96BQ9Y3D0 163 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 CLDN10P78369 228 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 ZNF331Q9NQX6 463 aaPredicted RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 ZNF587BE7ETH6 402 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 LDB3O75112 727 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 BTG1P62324 171 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SUMO1P63165 101 aaKnown RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 MCATQ8IVS2 390 aaKnown RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 PHYHIPQ92561 330 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 MRPL38Q96DV4 380 aaKnown RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SELENOIQ9C0D9 397 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 ACAD8Q9UKU7 415 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 MED16Q9Y2X0 877 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 HRH3Q9Y5N1 445 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 PHF1O43189 567 aaPredicted RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 RAB5AP20339 215 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 PDZK1IP1Q13113 114 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 IL34Q6ZMJ4 242 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 MOB3CQ70IA8 216 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SSX7Q7RTT5 188 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SFT2D1Q8WV19 159 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 LHX6Q9UPM6 363 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 PCK2Q16822 640 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 NXNL2Q5VZ03 156 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 GINS3Q9BRX5 216 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 ACSS1Q9NUB1 689 aaPredicted RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SIGLEC1Q9BZZ2 1709 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 MAN2B1O00754 1011 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SOCS6O14544 535 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 SNCGO76070 127 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 TXNDC12O95881 172 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 FCGR2AP12318 317 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 EEF1A2Q05639 463 aaKnown RBP15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 TESK1Q15569 626 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 BTNL8Q6UX41 500 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 MBOAT2Q6ZWT7 520 aa15.69■□□□□ 0.1
SMCHD1-201ENST00000320876 CSO75390 466 aaKnown RBP15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 CPN1P15169 458 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 CATSPERDQ86XM0 798 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 PRR22Q8IZ63 422 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 CELF2-AS1Q8N7Q2 184 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 OR52R1Q8NGF1 315 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 BRWD1Q9NSI6 2320 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 ZNF140P52738 457 aaPredicted RBP15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 KIAA0141Q14154 515 aaPredicted RBP15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 LYSMD2Q8IV50 215 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 GHSRQ92847 366 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 JTBO76095 146 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 OR7C1O76099 320 aaPredicted RBP15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 EIF4EP06730 217 aaKnown RBP15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 CCR6P51684 374 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 LINC00299Q6ZSB3 139 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 OR13C2Q8NGS9 318 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 SLC6A18Q96N87 628 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 TMPRSS5Q9H3S3 457 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 ZNF593O00488 134 aaPredicted RBP15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 ZNF217O75362 1048 aa15.68■□□□□ 0.1
SMCHD1-201ENST00000320876 ALG12Q9BV10 488 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms