RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MMP15P51511 669 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 FOXL2P58012 376 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 HLXQ14774 488 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF169Q14929 603 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 RCBTB1Q8NDN9 531 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 C17orf47Q8NEP4 570 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 HAVCR2Q8TDQ0 301 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 NPDC1Q9NQX5 325 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 DUSP22Q9NRW4 184 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 BABAM2Q9NXR7 383 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 MGAT4CQ9UBM8 478 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 ENTPD2Q9Y5L3 495 aa14.24□□□□□ -0.13
SHROOM1-201ENST00000319854 MPDZO75970 2070 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF98A6NK75 572 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 J3QLW9 94 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 PSMD9O00233 223 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 BRINP1O60477 761 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 NGFRP08138 427 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF19P17023 458 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 UBXN2BQ14CS0 331 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 CMIPQ8IY22 773 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 SDR9C7Q8NEX9 313 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 TSTD1Q8NFU3 115 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 OR4C3Q8NH37 302 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 DPYSL5Q9BPU6 564 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF559Q9BR84 538 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 TTYH1Q9H313 450 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 C8orf33Q9H7E9 229 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 COPZ2Q9P299 210 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 KIR2DS5A0A0G2JLQ3 304 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 A0A0G2JNG1 304 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 KIR2DS3K7RE56 304 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 NFYAP23511 347 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 NAA10P41227 235 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 FOXK2Q01167 660 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 KIR2DS5Q14953 304 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNHIT3Q15649 155 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 AMZ1Q400G9 498 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 PRPF38BQ5VTL8 546 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ALG8Q9BVK2 526 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 SCPEP1Q9HB40 452 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 KRCC1Q9NPI7 259 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 NTMQ9P121 344 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ADAM18Q9Y3Q7 739 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 TMEM184BQ9Y519 407 aaPredicted RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 HS3ST3A1Q9Y663 406 aa14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 ASCC3Q8N3C0 2202 aaKnown RBP14.23□□□□□ -0.13
SHROOM1-201ENST00000319854 CDC14CA4D256 554 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PRR23D1E9PI22 279 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 J3QRE1 110 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 KLF4O43474 513 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 SIX6O95475 246 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PRR23D2P0DMB1 279 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 ATF1P18846 271 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RPL35P42766 123 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 OR1D4P47884 311 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RAG2P55895 527 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RNF44Q7L0R7 432 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PRR22Q8IZ63 422 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RFLNBQ8N5W9 214 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 OR4C6Q8NH72 309 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 ZMYND19Q96E35 227 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 SEMA6CQ9H3T2 930 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 SELENOFO60613 162 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 KDM4BO94953 1096 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 HMGN1P05114 100 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 GRPRP30550 384 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 HTR1FP30939 366 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 GDNFP39905 211 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 HSD17B12Q53GQ0 312 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 FAAP20Q6NZ36 180 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 C10orf53Q8N6V4 93 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 FAM98AQ8NCA5 519 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 OR5W2Q8NH69 310 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 KCTD12Q96CX2 325 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 LMAN1LQ9HAT1 526 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PNO1Q9NRX1 252 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 HPF1Q9NWY4 346 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PCDHGA9Q9Y5G4 932 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 C17orf51A8MQB3 221 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 SUSD5O60279 629 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PTP4A3O75365 173 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 B3GALNT1O75752 331 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 UBL3O95164 117 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 THBS1P07996 1170 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RAB3AP20336 220 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RPL4P36578 427 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 RAB38P57729 211 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 OC90Q02509 493 aaPredicted RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 GAS6Q14393 721 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 ACBD7Q8N6N7 88 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 OR52E2Q8NGJ4 325 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 OR1S1Q8NH92 325 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 ABHD4Q8TB40 342 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 MRPS24Q96EL2 167 aaKnown RBP14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PRTFDC1Q9NRG1 225 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 MED9Q9NWA0 146 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 PFDN2Q9UHV9 154 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 GLS2Q9UI32 602 aa14.22□□□□□ -0.13
SHROOM1-201ENST00000319854 FAM86C2PA6NEL3 165 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms