RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 ACSM3Q53FZ2 586 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 PLA1AQ53H76 456 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 ZNF385CQ66K41 422 aaPredicted RBP16.62■□□□□ 0.25
SHISA3-201ENST00000319234 BPHLQ86WA6 291 aaPredicted RBP16.62■□□□□ 0.25
SHISA3-201ENST00000319234 TRMT10AQ8TBZ6 339 aaKnown RBP16.62■□□□□ 0.25
SHISA3-201ENST00000319234 OMA1Q96E52 524 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 SLC19A3Q9BZV2 496 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 OCIAD1Q9NX40 245 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 ABRACLQ9P1F3 81 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 ANKRD61A6NGH8 418 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 ALOX12BO75342 701 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 OR2T7P0C7T2 308 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 PNMTP11086 282 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 RAB3BP20337 219 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 PNLIPRP2P54317 469 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 FOXL2P58012 376 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 OR12D2P58182 307 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 CBLN3Q6UW01 205 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 BAIAP2L2Q6UXY1 529 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 OR2T27Q8NH04 317 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 CHRNA9Q9UGM1 479 aa16.62■□□□□ 0.25
SHISA3-201ENST00000319234 IGHV3-20A0A0C4DH32 117 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.61■□□□□ 0.25
SHISA3-201ENST00000319234 A0A1W2PQD3 144 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 VSTM2BA6NLU5 285 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 NTN3O00634 580 aaPredicted RBP16.61■□□□□ 0.25
SHISA3-201ENST00000319234 NDUFB2O95178 105 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 CLUP10909 449 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 CCR4P51679 360 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 OR10A3P58181 314 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 FAM27D1Q5T7N8 215 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 FCRLBQ6BAA4 426 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 CYB561A3Q8NBI2 242 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 METTL21AQ8WXB1 218 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 GHSRQ92847 366 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 MRPL48Q96GC5 212 aaKnown RBP16.61■□□□□ 0.25
SHISA3-201ENST00000319234 SEMA4CQ9C0C4 833 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 ABCG5Q9H222 651 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 ZCCHC4Q9H5U6 513 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 APMAPQ9HDC9 416 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 MCUBQ9NWR8 336 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 CACNG2Q9Y698 323 aa16.61■□□□□ 0.25
SHISA3-201ENST00000319234 ELOA3DA6NLF2 546 aaPredicted RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 NOTOA8MTQ0 251 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 FZD7O75084 574 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ARL6IP5O75915 188 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 FGF5P12034 268 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ABCD3P28288 659 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 PYCR1P32322 319 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 SLC6A8P48029 635 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 AGFG1P52594 562 aaKnown RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 GBX2P52951 348 aaPredicted RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 EMP2P54851 167 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 PITPNAQ00169 270 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 LGALS3BPQ08380 585 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 MRPL28Q13084 256 aaKnown RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 TRA2AQ13595 282 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ELOA3BQ3SY89 546 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 Q5BKY6 102 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 IL20RBQ6UXL0 311 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ATG4DQ86TL0 474 aaPredicted RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 NFAM1Q8NET5 270 aaPredicted RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ELOA3Q8NG57 546 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 OR5J2Q8NH18 312 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 SMIM19Q96E16 107 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 CNN2Q99439 309 aaKnown RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 SLX1AQ9BQ83 275 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 RABL2AQ9UBK7 228 aaPredicted RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 RABL2BQ9UNT1 228 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 A6NL46 340 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ALG1L2C9J202 215 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 D6RAR5 112 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 GATBO75879 557 aaKnown RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 UBL3O95164 117 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 DHFRP00374 187 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 PAHP00439 452 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 IGF2P01344 180 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ACVR1BP36896 505 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 RNF4P78317 190 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 IL11RAQ14626 422 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 THOC7Q6I9Y2 204 aaKnown RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 PHYHIPQ92561 330 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 ERMAPQ96PL5 475 aaPredicted RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 KLHL1Q9NR64 748 aa16.6■□□□□ 0.25
SHISA3-201ENST00000319234 MRPL39Q9NYK5 338 aaKnown RBP16.6■□□□□ 0.25
SHISA3-201ENST00000319234 IGKV1D-42A0A075B6H8 117 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 LANCL1O43813 399 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 EIF4E2O60573 245 aaKnown RBP16.59■□□□□ 0.25
SHISA3-201ENST00000319234 OR7A10O76100 309 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 ALX3O95076 343 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 CDK5R1Q15078 307 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 CDONQ4KMG0 1287 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 ZBTB44Q8NCP5 570 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 OR52E2Q8NGJ4 325 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 CMTM3Q96MX0 182 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 RTN4RQ9BZR6 473 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 FBXL4Q9UKA2 621 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 PPIEQ9UNP9 301 aaKnown RBP16.59■□□□□ 0.25
SHISA3-201ENST00000319234 ZNF337Q9Y3M9 751 aa16.59■□□□□ 0.25
SHISA3-201ENST00000319234 EEF1E1O43324 174 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms