RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 C17orf47Q8NEP4 570 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 ELOA3Q8NG57 546 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 C3orf49Q96BT1 292 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 UBQLN4Q9NRR5 601 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 DLL3Q9NYJ7 618 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 CTSFQ9UBX1 484 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 ST6GALNAC2Q9UJ37 374 aa12.91□□□□□ -0.34
VRK3-201ENST00000316763 PIEZO1Q92508 2521 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 HEATR5AQ86XA9 2040 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 TCRBV16S1A1N1A0A5B0 115 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 FAM172BPA6NC97 362 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 C17orf105B2RV13 164 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 IGF2P01344 180 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 GSTT2P0CG29 244 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 GSTT2BP0CG30 244 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 PITPNBP48739 271 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 SIRPAP78324 504 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 HSF2Q03933 536 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 TP53I3Q53FA7 332 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 TMEM53Q6P2H8 277 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 RPL22L1Q6P5R6 122 aaKnown RBP12.9□□□□□ -0.34
VRK3-201ENST00000316763 RPTNQ6XPR3 784 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 TRILQ7L0X0 811 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 SSX6Q7RTT6 188 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 OR14A16Q8NHC5 309 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 SMAP2Q8WU79 429 aaPredicted RBP12.9□□□□□ -0.34
VRK3-201ENST00000316763 PTPMT1Q8WUK0 201 aaPredicted RBP12.9□□□□□ -0.34
VRK3-201ENST00000316763 THAP4Q8WY91 577 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 TSLPQ969D9 159 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 VN1R1Q9GZP7 353 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.34
VRK3-201ENST00000316763 PPIL3Q9H2H8 161 aaKnown RBP12.9□□□□□ -0.34
VRK3-201ENST00000316763 TP63Q9H3D4 680 aaPredicted RBP12.9□□□□□ -0.34
VRK3-201ENST00000316763 WDR70Q9NW82 654 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 TEKT2Q9UIF3 430 aa12.9□□□□□ -0.34
VRK3-201ENST00000316763 MRTO4Q9UKD2 239 aaKnown RBP12.9□□□□□ -0.34
VRK3-201ENST00000316763 A0A0G2JMP0 313 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 A0A0X1KG70 313 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 A0A1W2PRG6 482 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 SCDO00767 359 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 ORC5O43913 435 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 GATBO75879 557 aaKnown RBP12.9□□□□□ -0.35
VRK3-201ENST00000316763 TFP02787 698 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 CCL4P13236 92 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 THBS2P35442 1172 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 GDI2P50395 445 aaKnown RBP12.9□□□□□ -0.35
VRK3-201ENST00000316763 CLDN20P56880 219 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 IL10RAQ13651 578 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 CDK5R1Q15078 307 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 CDONQ4KMG0 1287 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 CCDC58Q4VC31 144 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 LRRC17Q8N6Y2 441 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 NPEPL1Q8NDH3 523 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 PLPP5Q8NEB5 264 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 OR4M2Q8NGB6 313 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 OR4M1Q8NGD0 313 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 TRMT10AQ8TBZ6 339 aaKnown RBP12.9□□□□□ -0.35
VRK3-201ENST00000316763 ADAMTS14Q8WXS8 1223 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 RFT1Q96AA3 541 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 CLIP3Q96DZ5 547 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 STRADBQ9C0K7 418 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 NDEL1Q9GZM8 345 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 NRIP3Q9NQ35 241 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.35
VRK3-201ENST00000316763 SLC6A5Q9Y345 797 aa12.9□□□□□ -0.35
VRK3-201ENST00000316763 FER1L5A0AVI2 2057 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 B4E171 279 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 RGS13O14921 159 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 SLC43A1O75387 559 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 IL33O95760 270 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 CLPSP04118 112 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 EIF4EP06730 217 aaKnown RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 UBL4AP11441 157 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 NAA10P41227 235 aaPredicted RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 TSPAN7P41732 249 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 PPICP45877 212 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 OR10A3P58181 314 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 IFITM2Q01629 132 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 DBPQ10586 325 aaPredicted RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 SF3B4Q15427 424 aaKnown RBP eCLIP12.89□□□□□ -0.35
VRK3-201ENST00000316763 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 PYHIN1Q6K0P9 492 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 OVCH1Q7RTY7 1134 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 FAM71CQ8NEG0 241 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 STT3BQ8TCJ2 826 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 PHOSPHO1Q8TCT1 267 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 PHYHIPQ92561 330 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 PELI1Q96FA3 418 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 SLC46A1Q96NT5 459 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 GPX7Q96SL4 187 aaPredicted RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 WACQ9BTA9 647 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 EXOSC3Q9NQT5 275 aaKnown RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 PNO1Q9NRX1 252 aaKnown RBP12.89□□□□□ -0.35
VRK3-201ENST00000316763 ABRACLQ9P1F3 81 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 NLKQ9UBE8 527 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms