RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ASPNQ9BXN1 380 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 GPR87Q9BY21 358 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 TBL1XR1Q9BZK7 514 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 NDEL1Q9GZM8 345 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 SP140LQ9H930 580 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 SDHAF3Q9NRP4 125 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 ALKBH4Q9NXW9 302 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 ADAM18Q9Y3Q7 739 aa6.47□□□□□ -1.37
NPHP1-201ENST00000316534 TRBV5-5A0A0J9YX44 114 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 GTPBP1O00178 669 aaKnown RBP6.46□□□□□ -1.37
NPHP1-201ENST00000316534 KPNA4O00629 521 aaPredicted RBP6.46□□□□□ -1.37
NPHP1-201ENST00000316534 AQP2P41181 271 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 FOXL2P58012 376 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 B3GALT5-AS1P59052 145 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 DAB2P98082 770 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 CEP78Q5JTW2 689 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 DCAF12Q5T6F0 453 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 METAP1DQ6UB28 335 aaPredicted RBP6.46□□□□□ -1.37
NPHP1-201ENST00000316534 TPRA1Q86W33 373 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 RFLNBQ8N5W9 214 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 OR52E2Q8NGJ4 325 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 SMIM19Q96E16 107 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 CCDC32Q9BV29 185 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 NANSQ9NR45 359 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 SLC39A1Q9NY26 324 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 SSR3Q9UNL2 185 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 COPS3Q9UNS2 423 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 LOXL2Q9Y4K0 774 aa6.46□□□□□ -1.37
NPHP1-201ENST00000316534 MYO15AQ9UKN7 3530 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 WWP2O00308 870 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 GABRPO00591 440 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 RGS9O75916 674 aaPredicted RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 MT-ND5P03915 603 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 HRGP04196 525 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 RPL27P61353 136 aaKnown RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 CDK5R1Q15078 307 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 CSRP2Q16527 193 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 PHF19Q5T6S3 580 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 LIPKQ5VXJ0 399 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 SLC6A19Q695T7 634 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 RPL22L1Q6P5R6 122 aaKnown RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 Q6ZSR3 168 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 LIX1LQ8IVB5 337 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 WDFY1Q8IWB7 410 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 SLC35F2Q8IXU6 374 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 CENPSQ8N2Z9 138 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 GTPBP8Q8N3Z3 284 aaPredicted RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 PELI1Q96FA3 418 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 GAL3ST4Q96RP7 486 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 ATF6BQ99941 703 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 TRAF4Q9BUZ4 470 aaPredicted RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 RNF32Q9H0A6 362 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 NPAP1Q9NZP6 1156 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 ZNF346Q9UL40 294 aaKnown RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 CDC14CA4D256 554 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 UPK1BO75841 260 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 PMS2P2O95744 297 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 HLA-DPB1P04440 258 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 UCHL1P09936 223 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 NR4A1P22736 598 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 APEX1P27695 318 aaKnown RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 RORCP51449 518 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 BLVRAP53004 296 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 LGALS3BPQ08380 585 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 TCEAL6Q6IPX3 200 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 JMJD6Q6NYC1 403 aaPredicted RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 NR2C2APQ86WQ0 139 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 MCFD2Q8NI22 146 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 SLC25A43Q8WUT9 341 aaPredicted RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 PSMF1Q92530 271 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 TCEAL3Q969E4 200 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 KCTD12Q96CX2 325 aaKnown RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 RASD2Q96D21 266 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 TXNDC15Q96J42 360 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 CMKLR1Q99788 373 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 TRIM36Q9NQ86 728 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 TCFL5Q9UL49 500 aa6.46□□□□□ -1.38
NPHP1-201ENST00000316534 SPIN1Q9Y657 262 aaPredicted RBP6.46□□□□□ -1.38
NPHP1-201ENST00000316534 ASXL3Q9C0F0 2248 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 TEX13CA0A0J9YWL9 993 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 PHYHO14832 338 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 SLC30A4O14863 429 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 DNPH1O43598 174 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 HCRTR2O43614 444 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 GPRIN2O60269 458 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 FOXD2O60548 495 aaPredicted RBP6.45□□□□□ -1.38
NPHP1-201ENST00000316534 FAM157BP0CG42 384 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 EIF1P41567 113 aaKnown RBP6.45□□□□□ -1.38
NPHP1-201ENST00000316534 C6orf15Q6UXA7 325 aaPredicted RBP6.45□□□□□ -1.38
NPHP1-201ENST00000316534 OR6V1Q8N148 313 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 LSM14AQ8ND56 463 aaKnown RBP6.45□□□□□ -1.38
NPHP1-201ENST00000316534 SDR9C7Q8NEX9 313 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 OR10G3Q8NGC4 313 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 OR51G2Q8NGK0 314 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 DUSP19Q8WTR2 217 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 NMNAT3Q96T66 252 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 CHCHD6Q9BRQ6 235 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 YIPF2Q9BWQ6 316 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 SMURF1Q9HCE7 757 aa6.45□□□□□ -1.38
NPHP1-201ENST00000316534 ANKRD10Q9NXR5 420 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms